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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-ZC3H11B-5:1
OV
17
0.0281039
noncoding
48
chr1
219737346
219741245
-
0.4246
lnc-ZC3H11B-5
0.644
-4.727
-4.504
-4.289
2
noncoding
-0.411343359
IVEGVCKDMIMITHGVK
n[145]IVEGVCKDMIM[147]ITHGVK
LVEGMKVEVDLVRVVVSQERTILERTRIVEGVCKDMIMITHGVKLGEG
lnc-ZC3H11B-5:1
OV
17
0.0281039
noncoding
48
chr1
219737346
219741245
-
0.4246
lnc-ZC3H11B-5
0.644
-4.727
-4.504
-4.289
2
noncoding
-0.411343359
IVEGVCKDMIMITHGVK
n[145]IVEGVCKDM[147]IMITHGVK
LVEGMKVEVDLVRVVVSQERTILERTRIVEGVCKDMIMITHGVKLGEG
lnc-ZC3H11B-8:1
OV
10
0.00924789
noncoding
45
chr1
219622214
219630259
-
0.9721
lnc-ZC3H11B-8
0.476
0
0
0
5
noncoding
-0.44536631
LGAETMGFSK
n[145]LGAETM[147]GFSK
LILYPETLLKLLISLRRLGAETMGFSKYTIMSSANRDNLTSSFSN
lnc-ZC3H12B-16:1
BRCA-Luminal A
13
0.25241
noncoding
103
chrX
62779249
62780326
+
0.9999
lnc-ZC3H12B-16
1
0
0
0
145
noncoding
-0.346525316
LTDFNVTVEALSK
n[145]LTDFNVTVEALSK
LKMVIMKRWLPWRSKSVIKMRLNRLTDFNVTVEALSKSKAELMEISEDKTKIRRSPSTALPEVTDEYKNDVKNRSVYIKDFPTDATLEDIKKWLEDKGQVLYI
lnc-ZC3H12B-16:1
BRCA-HER2-enriched
13
0.25241
noncoding
103
chrX
62779249
62780326
+
0.9999
lnc-ZC3H12B-16
1
0
0
0
145
noncoding
-0.346525316
LTDFNVTVEALSK
n[145]LTDFNVTVEALSK
LKMVIMKRWLPWRSKSVIKMRLNRLTDFNVTVEALSKSKAELMEISEDKTKIRRSPSTALPEVTDEYKNDVKNRSVYIKDFPTDATLEDIKKWLEDKGQVLYI
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