top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZCCHC13-14:1 | BRCA-HER2-enriched | 9 | 0.999808 | coding | 259 | chrX | 74105571 | 74107958 | + | 0.9954 | lnc-ZCCHC13-14 | 1 | 0 | 0 | 0 | 17 | noncoding | -0.340216276 | IGAESWNWR | n[145]IGAESWNWR | MSEKKAKMPSASTESQRDWCRRMACVGHMTECTIVSSNHYGPIPVGSTWRFRVQVSEVGVHRPHVGGLHGRSNDGVYSLVLVGGFVDKVDRGDEFLYTGSGGKKLAGNKRIGTPSADQTLTNTNRALALNCDATLGDKIGAESWNWRAGKPVRVICSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGLLIWRYLLRRDDVEPAPWTSEGIEWSRRLCLHLQYPAGYPSDKERKKTKGQSKKQASGTTKRPISNV |
lnc-ZCCHC13-14:1 | BRCA-Luminal B | 13 | 0.999808 | coding | 259 | chrX | 74105571 | 74107958 | + | 0.1066 | lnc-ZCCHC13-14 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.340216276 | QASGTTKRPISNV | n[145]QASGTTKRPISNV | MSEKKAKMPSASTESQRDWCRRMACVGHMTECTIVSSNHYGPIPVGSTWRFRVQVSEVGVHRPHVGGLHGRSNDGVYSLVLVGGFVDKVDRGDEFLYTGSGGKKLAGNKRIGTPSADQTLTNTNRALALNCDATLGDKIGAESWNWRAGKPVRVICSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGLLIWRYLLRRDDVEPAPWTSEGIEWSRRLCLHLQYPAGYPSDKERKKTKGQSKKQASGTTKRPISNV |
lnc-ZCCHC13-14:1 | CCRC | 9 | 0.999808 | coding | 259 | chrX | 74105571 | 74107958 | + | 0.9398 | lnc-ZCCHC13-14 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.340216276 | IGAESWNWR | n[230]IGAESWNWR | MSEKKAKMPSASTESQRDWCRRMACVGHMTECTIVSSNHYGPIPVGSTWRFRVQVSEVGVHRPHVGGLHGRSNDGVYSLVLVGGFVDKVDRGDEFLYTGSGGKKLAGNKRIGTPSADQTLTNTNRALALNCDATLGDKIGAESWNWRAGKPVRVICSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGLLIWRYLLRRDDVEPAPWTSEGIEWSRRLCLHLQYPAGYPSDKERKKTKGQSKKQASGTTKRPISNV |
lnc-ZCCHC13-14:1 | EOGC | 17 | 0.999808 | coding | 121 | chrX | 74105571 | 74107958 | + | 0.9709 | lnc-ZCCHC13-14 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.340216276 | DVGLGAWFQAHIPSVAR | n[145]DVGLGAWFQAHIPSVAR | LNDIIQLLVCPDPNHLPGTSTQIEAKPCSDSPPKAKKAPRVGPSSQPPTSARAHLTDPSFGLYKVNELVDARDVGLGAWFQAHIPSVARASDGQSRGKTPLKNGSSCKRTNGNIHHKSKRT |
lnc-ZCCHC13-14:1 | EOGC | 26 | 0.999808 | coding | 121 | chrX | 74105571 | 74107958 | + | 0.119 | lnc-ZCCHC13-14 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.340216276 | DVGLGAWFQAHIPSVARASDGQSRGK | n[145]DVGLGAWFQAHIPSVARASDGQSRGK | LNDIIQLLVCPDPNHLPGTSTQIEAKPCSDSPPKAKKAPRVGPSSQPPTSARAHLTDPSFGLYKVNELVDARDVGLGAWFQAHIPSVARASDGQSRGKTPLKNGSSCKRTNGNIHHKSKRT |
Page 1 of 1
bottom of page