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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZDHHC17-16:1 | EOGC | 10 | 0.87055 | coding | 77 | chr12 | 76137424 | 76138610 | + | 0.0857 | lnc-ZDHHC17-16 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.311795231 | WAFFVASGPR | n[145]WAFFVASGPR | LGIADGMLQAGVTIVSKALKHFWKGVHYRWAFFVASGPRLGDIAELVDVGKIGPVIEQTFPFSKVPEAFLKVERGHI |
lnc-ZDHHC17-16:1 | HCC | 7 | 0.87055 | coding | 134 | chr12 | 76137424 | 76138610 | + | 0.7392 | lnc-ZDHHC17-16 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.311795231 | VGDLNDK | n[230]VGDLNDK | MRSLTNPNHSLIYQAASSPYVALTASSAINKVGDLNDKNCTGRRVLILGASSGVGSFAIQVMKAWDARVTAICAQDASELIKKLGADDVIDYKFGSVEEQLKSLKPFDFILGNVGGSTETWAQIFSRNGQEPPM |
lnc-ZDHHC17-16:1 | OV | 19 | 0.87055 | coding | 134 | chr12 | 76137424 | 76138610 | + | 0.4186 | lnc-ZDHHC17-16 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.311795231 | LGADDVIDYKFGSVEEQLK | n[145]LGADDVIDYKFGSVEEQLK | MRSLTNPNHSLIYQAASSPYVALTASSAINKVGDLNDKNCTGRRVLILGASSGVGSFAIQVMKAWDARVTAICAQDASELIKKLGADDVIDYKFGSVEEQLKSLKPFDFILGNVGGSTETWAQIFSRNGQEPPM |
lnc-ZDHHC17-16:1 | OV | 29 | 0.87055 | coding | 134 | chr12 | 76137424 | 76138610 | + | 0.3371 | lnc-ZDHHC17-16 | 1 | 0 | 0 | 0 | 5 | noncoding | -0.311795231 | SLTNPNHSLIYQAASSPYVALTASSAINK | n[145]SLTNPNHSLIYQAASSPYVALTASSAINK | MRSLTNPNHSLIYQAASSPYVALTASSAINKVGDLNDKNCTGRRVLILGASSGVGSFAIQVMKAWDARVTAICAQDASELIKKLGADDVIDYKFGSVEEQLKSLKPFDFILGNVGGSTETWAQIFSRNGQEPPM |
lnc-ZDHHC17-7:1 | BRCA-HER2-enriched | 8 | 0.034644 | noncoding | 50 | chr12 | 76721533 | 76722286 | + | 0.2532 | lnc-ZDHHC17-7 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.365518918 | AEDKAPEK | n[145]AEDKAPEK | MEDIKEKKKFPAVLESPQKKVKEFCRAEDKAPEKEVCPKDALKGKEEAHL |
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