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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-ZFAT-1:3
BRCA-Basal-like
7
0.0951213
noncoding
48
chr8
134804929
134832309
-
0.9985
lnc-ZFAT-1
0.67
-5.061
-5.467
-4.431
60
coding
0.681006693
SVAAICK
n[145]SVAAICK
MLVNTMSNITEELCCTHRLCPSWSADYSDTDFQGEGFQKSVAAICKCF
lnc-ZFAT-1:3
BRCA-Luminal B
7
0.0951213
noncoding
48
chr8
134804929
134832309
-
0.9985
lnc-ZFAT-1
0.67
-5.061
-5.467
-4.431
60
coding
0.681006693
SVAAICK
n[145]SVAAICK
MLVNTMSNITEELCCTHRLCPSWSADYSDTDFQGEGFQKSVAAICKCF
lnc-ZFAT-1:3
BRCA-HER2-enriched
7
0.0951213
noncoding
48
chr8
134804929
134832309
-
0.9985
lnc-ZFAT-1
0.67
-5.061
-5.467
-4.431
60
coding
0.681006693
SVAAICK
n[145]SVAAICK
MLVNTMSNITEELCCTHRLCPSWSADYSDTDFQGEGFQKSVAAICKCF
lnc-ZFAT-1:3
CCRC
7
0.0951213
noncoding
48
chr8
134804929
134832309
-
0.9984
lnc-ZFAT-1
0.67
-5.061
-5.467
-4.431
11
coding
0.681006693
SVAAICK
n[230]SVAAICK
MLVNTMSNITEELCCTHRLCPSWSADYSDTDFQGEGFQKSVAAICKCF
lnc-ZFAT-1:3
CRC
14
0.0951213
noncoding
231
chr8
134804929
134832309
-
0.7167
lnc-ZFAT-1
1
0.204
0
5.566
1
coding
0.681006693
EVGGPGVGAAGSFR
LLSQCGRRRSPALAAPPAPRPSRAPHPGAGASPRPLPRPLQARLGLGARGAGSGRVGAAAGRRPPRPTPDPGPGECLGAGEGVRSGEDTGRSAPRLTPFRGADRLSGHGLWGASWGHLCRGVLFWRPRPSGSGVRVVGGSGPGSGRCGAALECSRGDRVWGGRREAGGPLPGAREVGGPGVGAAGSFREMFIRQLQETLPSGRGALLFAGASESGGFHSKTRVKPGWTGRE
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