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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-ZFHX4-6:12
EOGC
9
0.0269536
noncoding
108
chr8
77000303
77008673
+
0.6945
lnc-ZFHX4-6
1
-0.671
0.528
1.83
1
noncoding
-0.314393098
LFISAGSGR
n[145]LFISAGSGR
LGGQGFLCLRTSRRASGRRRRVAARRLRASGVPCSLSEEDRLRDGLVGREPSGRWLRRAWGSCAALGDLPALGACVHREDRLFISAGSGRQVAGPSVIRPAKRSRETP
lnc-ZFHX4-6:4
EOGC
7
0.026746
noncoding
56
chr8
77000154
77001982
+
0.9995
lnc-ZFHX4-6
1
1.664
-0.251
3.323
44
noncoding
-0.330982722
GDWPVGR
n[145]GDWPVGR
LLKALDGQTTANADKPKSRRAEKPKRTPARGDWPVGRKNSVSDWQESHEPRVKKSH
lnc-ZFHX4-6:6
EOGC
14
0.0751123
noncoding
181
chr8
77000154
77012005
+
0.187
lnc-ZFHX4-6
1
1.664
0.528
3.323
1
coding
0.696039826
GLGGQGFLCLRTSR
n[145]GLGGQGFLCLRTSR
LLKALDGQTTANADKPKSRRAEKPKRTPARGDWPVGRKNSVSDWQESHEPVSPGSGAASEDTTSVEGPRGSRGLGGQGFLCLRTSRRASGRRRRVAARRLRASGVPCSLSEEDRLRDGLVGREPSGRWLRRAWGSCAALGDLPALGACVHREDRLFISAGSGRQVAGPSVIRPAKRSRETP
lnc-ZFP1-2:1
BRCA-Luminal B
9
0.0368589
noncoding
44
chr16
75140695
75141203
+
0.9997
lnc-ZFP1-2
0.664
0
0
0
90
noncoding
-0.39025099
ESLLIFGQK
n[145]ESLLIFGQK
LARRRESLLIFGQKLFLNIDFLQKLFLNIDFLWFTVQKKEQKIE
lnc-ZFP1-2:1
BRCA-Basal-like
9
0.0368589
noncoding
44
chr16
75140695
75141203
+
0.9997
lnc-ZFP1-2
0.664
0
0
0
90
noncoding
-0.39025099
ESLLIFGQK
n[145]ESLLIFGQK
LARRRESLLIFGQKLFLNIDFLQKLFLNIDFLWFTVQKKEQKIE
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