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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZIC4-3:3 | OV | 8 | 0.414921 | noncoding | 49 | chr3 | 147131121 | 147245191 | - | 0.9983 | lnc-ZIC4-3 | 0.706 | -4.736 | -4.801 | -4.32 | 3 | coding | 0.71632949 | YGFINCFK | n[145]YGFINCFK | MYGFINCFKATHLVNYHTGQERELCHSPQNLVSYVSNIIPTFSQKQPLC |
lnc-ZIC4-3:3 | PRAD | 13 | 0.414921 | noncoding | 78 | chr3 | 147131121 | 147245191 | - | 0.989 | lnc-ZIC4-3 | 0.383 | 0 | 0 | 0 | 6 | coding | 0.71632949 | TQAIASESSGPKP | MLSQDNGENVSSACLKSSQQSLPSQAGGLGGKKWFHVPDPGPRCFVQSEDLVPCVPAMAKRGQCRTQAIASESSGPKP | |
lnc-ZIC4-4:1 | OSCC | 25 | 0.276198 | noncoding | 297 | chr3 | 147409627 | 147411088 | - | 0.62 | lnc-ZIC4-4 | 1 | 13.284 | 4.757 | 3.344 | 1 | coding | 0.790033131 | GVEGCAGIGADVARVMVMAQGRSSR | n[145]GVEGCAGIGADVARVMVMAQGRSSR | LLGLDPLADELLLDGLAHVAEEGAGAVMRGHVHVHGPVAVQLRRSIVLRTRAGHLAVLLRSRVHVPREAEPHLPVDHVRRRVAGSLLVKPGEEEVARGVRVAVWAPEAPGRCSKEAVLCAGCRRRVAKTPVAEQKVPRGVEGCAGIGADVARVMVMAQGRSSRVAWRLRREGRLAGRSQLVRTGVELEGAHAVGERVDAQAHVSFGHVARGVVAGRAKGGHADRWVLGAGVQEHRGCSGRAPASPAPPTLASRGGKIGRRRRNKRRRKRNVSASAATASPSLRLAQRAPPYFSTSPS |
lnc-ZIC4-4:1 | OSCC | 14 | 0.276198 | noncoding | 297 | chr3 | 147409627 | 147411088 | - | 0.5365 | lnc-ZIC4-4 | 1 | 13.284 | 4.757 | 3.344 | 1 | coding | 0.790033131 | TGVELEGAHAVGER | n[145]TGVELEGAHAVGER | LLGLDPLADELLLDGLAHVAEEGAGAVMRGHVHVHGPVAVQLRRSIVLRTRAGHLAVLLRSRVHVPREAEPHLPVDHVRRRVAGSLLVKPGEEEVARGVRVAVWAPEAPGRCSKEAVLCAGCRRRVAKTPVAEQKVPRGVEGCAGIGADVARVMVMAQGRSSRVAWRLRREGRLAGRSQLVRTGVELEGAHAVGERVDAQAHVSFGHVARGVVAGRAKGGHADRWVLGAGVQEHRGCSGRAPASPAPPTLASRGGKIGRRRRNKRRRKRNVSASAATASPSLRLAQRAPPYFSTSPS |
lnc-ZIC4-4:1 | OV | 25 | 0.276198 | noncoding | 297 | chr3 | 147409627 | 147411088 | - | 0.0826 | lnc-ZIC4-4 | 1 | 13.284 | 4.757 | 3.344 | 1 | coding | 0.790033131 | GVEGCAGIGADVARVMVMAQGRSSR | n[145]GVEGCAGIGADVARVMVMAQGRSSR | LLGLDPLADELLLDGLAHVAEEGAGAVMRGHVHVHGPVAVQLRRSIVLRTRAGHLAVLLRSRVHVPREAEPHLPVDHVRRRVAGSLLVKPGEEEVARGVRVAVWAPEAPGRCSKEAVLCAGCRRRVAKTPVAEQKVPRGVEGCAGIGADVARVMVMAQGRSSRVAWRLRREGRLAGRSQLVRTGVELEGAHAVGERVDAQAHVSFGHVARGVVAGRAKGGHADRWVLGAGVQEHRGCSGRAPASPAPPTLASRGGKIGRRRRNKRRRKRNVSASAATASPSLRLAQRAPPYFSTSPS |
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