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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-ZNF449-3:4
CCRC
13
0.119871
noncoding
75
chrX
135422617
135428022
+
0.0781
lnc-ZNF449-3
0.272
-4.674
-4.311
-4.861
1
noncoding
-0.293419745
WTPVLDLPSPLSR
LGLGALGALLLPRATQGSEHPDKEDPSKRTGANALWHLPPQEKWTPVLDLPSPLSRWSSLSPLQGSHDLAKQDGK
lnc-ZNF473-4:1
OV
16
0.114564
noncoding
33
chr19
49984650
49987704
+
0.9988
lnc-ZNF473-4
0.236
-3.868
-6.097
-5.924
16
noncoding
-0.341042746
LKEDEILGMVPLMPIK
n[145]LKEDEILGMVPLMPIK
LKEDEILGMVPLMPIKHIPKNIIEFLRTQMHLN
lnc-ZNF33A-5:1
BRCA-Basal-like
9
0.901537
coding
96
chr10
37894636
37896666
+
0.2965
lnc-ZNF33A-5
1
-3.278
-3.228
5.736
4
noncoding
-0.38002403
TFICNSVLK
n[145]TFICNSVLK
MHTGDKPYVCKKCGKTFYHKADYTVHKRTHRGEKSYYCNKCGKTFICNSVLKSHQRTHTGEKPYGCNECGKSFSEKSVLTVHQRIHTGEKPYKCNE
lnc-ZNF33A-5:1
BRCA-Luminal B
9
0.901537
coding
96
chr10
37894636
37896666
+
0.2965
lnc-ZNF33A-5
1
-3.278
-3.228
5.736
4
noncoding
-0.38002403
TFICNSVLK
n[145]TFICNSVLK
MHTGDKPYVCKKCGKTFYHKADYTVHKRTHRGEKSYYCNKCGKTFICNSVLKSHQRTHTGEKPYGCNECGKSFSEKSVLTVHQRIHTGEKPYKCNE
lnc-ZNF33A-5:1
BRCA-Luminal A
9
0.901537
coding
96
chr10
37894636
37896666
+
0.2965
lnc-ZNF33A-5
1
-3.278
-3.228
5.736
4
noncoding
-0.38002403
TFICNSVLK
n[145]TFICNSVLK
MHTGDKPYVCKKCGKTFYHKADYTVHKRTHRGEKSYYCNKCGKTFICNSVLKSHQRTHTGEKPYGCNECGKSFSEKSVLTVHQRIHTGEKPYKCNE
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