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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF439-1:1 | BRCA-Luminal B | 24 | 0.109021 | noncoding | 115 | chr19 | 11848725 | 11851110 | + | 0.9973 | lnc-ZNF439-1 | 0.117 | 0 | 0 | 0 | 21 | noncoding | -0.32969903 | LSHLPSCHTEALNFQGVLGVPLAK | n[145]LSHLPSCHTEALNFQGVLGVPLAK | LSHLPSCHTEALNFQGVLGVPLAKSQSLHLAGKVLCLFLFLFETESPSVAQAGVQWLDLGSLQPLPSGFKGFSCLSLLSSWDYRHAPPPPANCCIFSRDGVSPCWPGCSQTPDLK |
lnc-ZNF439-1:1 | BRCA-HER2-enriched | 24 | 0.109021 | noncoding | 115 | chr19 | 11848725 | 11851110 | + | 0.9973 | lnc-ZNF439-1 | 0.117 | 0 | 0 | 0 | 21 | noncoding | -0.32969903 | LSHLPSCHTEALNFQGVLGVPLAK | n[145]LSHLPSCHTEALNFQGVLGVPLAK | LSHLPSCHTEALNFQGVLGVPLAKSQSLHLAGKVLCLFLFLFETESPSVAQAGVQWLDLGSLQPLPSGFKGFSCLSLLSSWDYRHAPPPPANCCIFSRDGVSPCWPGCSQTPDLK |
lnc-ZNF439-1:1 | BRCA-Basal-like | 24 | 0.109021 | noncoding | 115 | chr19 | 11848725 | 11851110 | + | 0.9973 | lnc-ZNF439-1 | 0.117 | 0 | 0 | 0 | 21 | noncoding | -0.32969903 | LSHLPSCHTEALNFQGVLGVPLAK | n[145]LSHLPSCHTEALNFQGVLGVPLAK | LSHLPSCHTEALNFQGVLGVPLAKSQSLHLAGKVLCLFLFLFETESPSVAQAGVQWLDLGSLQPLPSGFKGFSCLSLLSSWDYRHAPPPPANCCIFSRDGVSPCWPGCSQTPDLK |
lnc-ZNF44-2:1 | OV | 10 | 0.190742 | noncoding | 116 | chr19 | 12190978 | 12193971 | - | 0.3099 | lnc-ZNF44-2 | 0.251 | 0 | 0 | 0 | 1 | noncoding | -0.34187488 | SGTVAGGCGR | n[145]SGTVAGGCGR | MAKPVSTQNTKISQVSWHIPVIQATPEQDHVPSASRKKAVKQALADHSGSILKGFCLFVFWVFFETKSGTVAGGCGRRITYTREVEVAVSQDRITELQPGQQSKTLSHKRKKKKNY |
lnc-ZNF445-5:3 | OV | 8 | 0.0702515 | noncoding | 61 | chr3 | 44326616 | 44338333 | - | 0.8106 | lnc-ZNF445-5 | 0.823 | 0 | 0 | 0 | 2 | noncoding | -0.32810688 | AVFLGQRR | n[145]AVFLGQRR | MGPLDGIRCLLSPRHLQSIVTALTCIKFTRSERKAVFLGQRRTNQEREKGNSAVPGQPPPD |
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