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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF398-3:1 | OV | 15 | 0.0422195 | noncoding | 50 | chr7 | 149029135 | 149032388 | + | 0.9102 | lnc-ZNF398-3 | 0.995 | -4.447 | -4.144 | -3.898 | 15 | noncoding | -0.372323724 | KYQIGNLVVYIDLNK | n[145]KYQIGNLVVYIDLNK | LSKLCLVLFSFLVIFCKRKYQIGNLVVYIDLNKSLRFSLLTTLEKKTRLR |
lnc-ZNF398-3:1 | OV | 12 | 0.0422195 | noncoding | 50 | chr7 | 149029135 | 149032388 | + | 0.8715 | lnc-ZNF398-3 | 0.995 | -4.447 | -4.144 | -3.898 | 2 | noncoding | -0.372323724 | SLRFSLLTTLEK | n[145]SLRFSLLTTLEK | LSKLCLVLFSFLVIFCKRKYQIGNLVVYIDLNKSLRFSLLTTLEKKTRLR |
lnc-ZNF41-2:1 | BRCA-Luminal A | 8 | 0.992708 | coding | 116 | chrX | 47509786 | 47513478 | - | 0.8511 | lnc-ZNF41-2 | 1 | 0 | 0 | 0 | 11 | coding | 0.7509824 | TPPDALAR | n[145]TPPDALAR | LSAPHAHLLAPRSVRHLELDLAALLPSRLCRGPSAARLHAPQAPGSRQEPPSPPAPARGVVPGSRTPPDALARGRSFLGEAACAYGPGDHRGGAGTQLLGHREPRGVVYGRGHLLH |
lnc-ZNF41-2:1 | BRCA-Basal-like | 8 | 0.992708 | coding | 116 | chrX | 47509786 | 47513478 | - | 0.8511 | lnc-ZNF41-2 | 1 | 0 | 0 | 0 | 11 | coding | 0.7509824 | TPPDALAR | n[145]TPPDALAR | LSAPHAHLLAPRSVRHLELDLAALLPSRLCRGPSAARLHAPQAPGSRQEPPSPPAPARGVVPGSRTPPDALARGRSFLGEAACAYGPGDHRGGAGTQLLGHREPRGVVYGRGHLLH |
lnc-ZNF41-2:1 | BRCA-Luminal B | 8 | 0.992708 | coding | 116 | chrX | 47509786 | 47513478 | - | 0.8511 | lnc-ZNF41-2 | 1 | 0 | 0 | 0 | 11 | coding | 0.7509824 | TPPDALAR | n[145]TPPDALAR | LSAPHAHLLAPRSVRHLELDLAALLPSRLCRGPSAARLHAPQAPGSRQEPPSPPAPARGVVPGSRTPPDALARGRSFLGEAACAYGPGDHRGGAGTQLLGHREPRGVVYGRGHLLH |
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