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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF485-68:20 | PRAD | 13 | 0.0153642 | noncoding | 51 | chr10 | 43909308 | 43914412 | + | 0.5143 | lnc-ZNF485-68 | 0.006 | -5.269 | -5.057 | -5.844 | 3 | noncoding | -0.359526139 | SSISGVISISNRR | LTPKHWFIIQLAIVEPQPMVEPKSSISGVISISNRRRVTFTDSYSPFGFQA | |
lnc-ZNF485-68:25 | PRAD | 17 | 0.326476 | noncoding | 50 | chr10 | 43939002 | 43944466 | + | 0.7887 | lnc-ZNF485-68 | 0.256 | -3.579 | -5.103 | -5.454 | 4 | noncoding | -0.315641828 | ISLSQLTWGSFIAHAVK | LQWTKISLSQLTWGSFIAHAVKAAVWRWGHRAGSMDGERILNNFDSAGFS | |
lnc-ZNF485-68:26 | OV | 11 | 0.304158 | noncoding | 149 | chr10 | 43943236 | 43983964 | + | 0.5353 | lnc-ZNF485-68 | 0.128 | -3.792 | -2.929 | -4.779 | 2 | noncoding | -0.322041254 | GGLTESLTPER | n[145]GGLTESLTPER | LRKRAEDGRILFREMGGEREERGGLTESLTPERERESWEGVRWTPWGFQEHQKEDSPVPGAGPWSPSHALVSGSRPWAAWPQSQCSLGFPAAAGPGSSILSVVGVLRCILSASTDVTRESQRKAGRWLRSISVGCPQPSEKASHSKVPC |
lnc-ZNF485-68:26 | OV | 13 | 0.304158 | noncoding | 149 | chr10 | 43943236 | 43983964 | + | 0.5565 | lnc-ZNF485-68 | 0.128 | -3.792 | -2.929 | -4.779 | 2 | noncoding | -0.322041254 | ILFREMGGEREER | n[145]ILFREMGGEREER | LRKRAEDGRILFREMGGEREERGGLTESLTPERERESWEGVRWTPWGFQEHQKEDSPVPGAGPWSPSHALVSGSRPWAAWPQSQCSLGFPAAAGPGSSILSVVGVLRCILSASTDVTRESQRKAGRWLRSISVGCPQPSEKASHSKVPC |
lnc-ZNF485-68:5 | OV | 8 | 0.726064 | coding | 45 | chr10 | 43845305 | 43877428 | + | 0.9118 | lnc-ZNF485-68 | 0.779 | 0 | 0 | 0 | 2 | noncoding | -0.346242939 | ADGSPEIR | n[145]ADGSPEIR | LDLWSEMAESQGQERWLMPVIPALWEAKADGSPEIRSSRPAWPTK |
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