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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF479-23:1 | OSCC | 16 | 0.669856 | coding | 330 | chr7 | 56809213 | 56848800 | - | 0.2111 | lnc-ZNF479-23 | 0.569 | 0 | 0 | 0 | 1 | noncoding | -0.18379087 | EALPHTGLSHAEGRQR | n[145]EALPHTGLSHAEGRQR | LPPGGLYRPRSGWRTASAGPALASQGRLQAQLWPHGGLPGPSPCLPPSSLCAAQLLRHGGLLRPNSCLWHPFERREPLPHIGLSHAEGGHREPLPHSGLSNAEGGQREALPHTGLSHAEGRQREALPHSGLSHAEGSPPSRWPVEAQFMPLLASPGPAPACWRPLEAQPLPQQWALHAHLLPCRGVLGPGSRLGAAPAGPAPASRPSGGQAHASERPLPAWRLLLCMGSRSCTSSSRPLQAQRFLPAASAGPDCRQVGLSRDSSCLPADSAGPSRPQVSLPRPSSGLSAASPGAKVPRVRLSRSSSSCLPVASFSPAQLMPPGDLPRPRF |
lnc-ZNF479-23:1 | OSCC | 34 | 0.669856 | coding | 330 | chr7 | 56809213 | 56848800 | - | 0.3692 | lnc-ZNF479-23 | 0.569 | 0 | 0 | 0 | 1 | noncoding | -0.18379087 | EALPHTGLSHAEGRQREALPHSGLSHAEGSPPSR | n[145]EALPHTGLSHAEGRQREALPHSGLSHAEGSPPSR | LPPGGLYRPRSGWRTASAGPALASQGRLQAQLWPHGGLPGPSPCLPPSSLCAAQLLRHGGLLRPNSCLWHPFERREPLPHIGLSHAEGGHREPLPHSGLSNAEGGQREALPHTGLSHAEGRQREALPHSGLSHAEGSPPSRWPVEAQFMPLLASPGPAPACWRPLEAQPLPQQWALHAHLLPCRGVLGPGSRLGAAPAGPAPASRPSGGQAHASERPLPAWRLLLCMGSRSCTSSSRPLQAQRFLPAASAGPDCRQVGLSRDSSCLPADSAGPSRPQVSLPRPSSGLSAASPGAKVPRVRLSRSSSSCLPVASFSPAQLMPPGDLPRPRF |
lnc-ZNF479-23:1 | OSCC | 31 | 0.669856 | coding | 330 | chr7 | 56809213 | 56848800 | - | 0.3725 | lnc-ZNF479-23 | 0.569 | 0 | 0 | 0 | 1 | noncoding | -0.18379087 | VRLSRSSSSCLPVASFSPAQLMPPGDLPRPR | n[145]VRLSRSSSSCLPVASFSPAQLMPPGDLPRPR | LPPGGLYRPRSGWRTASAGPALASQGRLQAQLWPHGGLPGPSPCLPPSSLCAAQLLRHGGLLRPNSCLWHPFERREPLPHIGLSHAEGGHREPLPHSGLSNAEGGQREALPHTGLSHAEGRQREALPHSGLSHAEGSPPSRWPVEAQFMPLLASPGPAPACWRPLEAQPLPQQWALHAHLLPCRGVLGPGSRLGAAPAGPAPASRPSGGQAHASERPLPAWRLLLCMGSRSCTSSSRPLQAQRFLPAASAGPDCRQVGLSRDSSCLPADSAGPSRPQVSLPRPSSGLSAASPGAKVPRVRLSRSSSSCLPVASFSPAQLMPPGDLPRPRF |
lnc-ZNF479-5:1 | OV | 7 | 0.114496 | noncoding | 49 | chr7 | 56875384 | 56882146 | - | 0.9964 | lnc-ZNF479-5 | 1 | 0 | 0 | 0 | 17 | noncoding | -0.30483704 | EVDILHK | n[145]EVDILHK | MVRCCIHKPTSQEPAVKVIDVTSGSSFTPEEVQELQEATLKEVDILHKV |
lnc-ZNF479-6:1 | CCRC | 12 | 0.999991 | coding | 355 | chr7 | 56638942 | 56650696 | - | 0.7283 | lnc-ZNF479-6 | 1 | 0 | 0 | 0 | 1 | coding | 0.595573629 | YNGLHQCLSTTR | n[230]YNGLHQCLSTTR | LTFRDVAVEFSPEEWECLDSAQQRLYRDVMLENYRNLVSLGLAIFKPDLMTCLEQRKEPWNVKRQEAVAKHPSPCCFHFTAEVLPEHDIKDSFQKVILRKYGSSDLNTLHLKKDYQSVGNCKGQKSRYNGLHQCLSTTRSKTSQCNKCGKAFGLCSIFTEHKEIFSKEKCYKCEECGKDCRLFSDFTLQKRIHTAERCYKCEDCAKVFKKFSNLTEHNRVHPGEKPYKCEECGKTFTCSSTLIKHKRNHSGDRPGKCEECNKAYRWFSHLAKHKRIHTGEKSYKCNECGKAFTWISVLSHHKKIHTREKPYICEGCGKAFTRSSTLISHKRIHMEERPYKCEECNKAYKWFSNLA |
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