top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF534-1:2 | OV | 10 | 0.0938092 | noncoding | 72 | chr19 | 52453581 | 52458836 | + | 0.9946 | lnc-ZNF534-1 | 0.461 | 0 | 0 | 0 | 4 | noncoding | -0.353028723 | TIDLFFPPLK | n[145]TIDLFFPPLK | LAFDTQCFSVPNCTRWKMCSSRGKTIDLFFPPLKLNTVVNTEPRILHLWSPNVWGFLPTNKQFSIRHQLGVP |
lnc-ZNF536-8:2 | BRCA-Luminal B | 20 | 0.51404 | coding | 60 | chr19 | 31350045 | 31374019 | + | 0.9983 | lnc-ZNF536-8 | 0.008 | 0 | -4.455 | 0 | 22 | noncoding | -0.276681645 | HQVGALLPALTWNAGIWVFR | n[145]HQVGALLPALTWNAGIWVFR | LYPLSKCEGICPRCRLLGSPGLGSTRGERHQVGALLPALTWNAGIWVFRLPHASPHHILG |
lnc-ZNF536-8:2 | BRCA-Luminal A | 20 | 0.51404 | coding | 60 | chr19 | 31350045 | 31374019 | + | 0.9983 | lnc-ZNF536-8 | 0.008 | 0 | -4.455 | 0 | 22 | noncoding | -0.276681645 | HQVGALLPALTWNAGIWVFR | n[145]HQVGALLPALTWNAGIWVFR | LYPLSKCEGICPRCRLLGSPGLGSTRGERHQVGALLPALTWNAGIWVFRLPHASPHHILG |
lnc-ZNF536-8:2 | BRCA-HER2-enriched | 20 | 0.51404 | coding | 60 | chr19 | 31350045 | 31374019 | + | 0.9983 | lnc-ZNF536-8 | 0.008 | 0 | -4.455 | 0 | 22 | noncoding | -0.276681645 | HQVGALLPALTWNAGIWVFR | n[145]HQVGALLPALTWNAGIWVFR | LYPLSKCEGICPRCRLLGSPGLGSTRGERHQVGALLPALTWNAGIWVFRLPHASPHHILG |
lnc-ZNF536-8:2 | CCRC | 22 | 0.51404 | coding | 142 | chr19 | 31350045 | 31374019 | + | 0.0723 | lnc-ZNF536-8 | 1 | -3.06 | -1.207 | 0 | 1 | noncoding | -0.276681645 | AGRDLSNCHFTDDNLLHPQVPR | n[230]AGRDLSNCHFTDDNLLHPQVPR | MLCDKNKASGNSHVSNQNVRAGRDLSNCHFTDDNLLHPQVPRIPAQDSLPQPSWIVLGGTRSAHLAHSLPEHKAVSHQGWMGPASLSTVAVHTETEMKPYCRVHRGQRSSFLVYTPGAIASFISVPISEAPSHFKRPENMFN |
Page 1 of 1
bottom of page