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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZNF727-8:1 | PRAD | 20 | 0.0192143 | noncoding | 43 | chr7 | 64085559 | 64086576 | + | 0.9921 | lnc-ZNF727-8 | 0.017 | 0 | 0 | 0 | 18 | noncoding | -0.413915021 | HLLGEVEANSMQFKPGIADR | HLLGEVEANSM[147]QFKPGIADR | MDILAKLSENLVKFLDYVSTFKHLLGEVEANSMQFKPGIADRC |
lnc-ZNF727-9:1 | OSCC | 21 | 0.124586 | noncoding | 109 | chr7 | 63931140 | 63931968 | + | 0.1533 | lnc-ZNF727-9 | 1 | 0 | 0 | 0 | 2 | coding | 0.710087004 | GGHISHGRHQGEVHPPPDLPR | n[145]GGHISHGRHQGEVHPPPDLPR | LLCRSIPKAALGSECSCSSAARRGMPRDGLTTTQAAVRLGRPRGRGRGGHISHGRHQGEVHPPPDLPRRPVQRSLPPGLGRLCGNKGTQRGLTAPALKQGWNQAIRFFS |
lnc-ZNF727-9:1 | OSCC | 10 | 0.124586 | noncoding | 44 | chr7 | 63931140 | 63931968 | + | 0.9408 | lnc-ZNF727-9 | 1 | 0 | 0 | 0 | 14 | coding | 0.710087004 | MFLFLSSQTR | n[145]MFLFLSSQTR | MFLFLSSQTRDAQGRPYNNAGCCAAGAPAWPGPWWSYFPWTPSR |
lnc-ZNF727-9:1 | OSCC | 10 | 0.124586 | noncoding | 44 | chr7 | 63931140 | 63931968 | + | 0.9408 | lnc-ZNF727-9 | 1 | 0 | 0 | 0 | 14 | coding | 0.710087004 | MFLFLSSQTR | n[145]M[147]FLFLSSQTR | MFLFLSSQTRDAQGRPYNNAGCCAAGAPAWPGPWWSYFPWTPSR |
lnc-ZNF727-9:1 | OSCC | 8 | 0.124586 | noncoding | 109 | chr7 | 63931140 | 63931968 | + | 0.9938 | lnc-ZNF727-9 | 1 | 0 | 0 | 0 | 3 | coding | 0.710087004 | SLPPGLGR | n[145]SLPPGLGR | LLCRSIPKAALGSECSCSSAARRGMPRDGLTTTQAAVRLGRPRGRGRGGHISHGRHQGEVHPPPDLPRRPVQRSLPPGLGRLCGNKGTQRGLTAPALKQGWNQAIRFFS |
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