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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VIM-AS1:5 | BRCA-Basal-like | 9 | 0.0166715 | noncoding | 35 | chr10 | 17214238 | 17226898 | - | 0.9991 | VIM-AS1 | 0.419 | -5.602 | -6.327 | -5.397 | 2 | noncoding | -0.405179094 | IDSIDISKK | n[145]IDSIDISKK | LFPQKIYFLKIFTQDCCENKIDSIDISKKKYIFKK |
VIM-AS1:5 | CCRC | 9 | 0.0166715 | noncoding | 35 | chr10 | 17214238 | 17226898 | - | 0.9995 | VIM-AS1 | 0.419 | -5.602 | -6.327 | -5.397 | 9 | noncoding | -0.405179094 | IDSIDISKK | n[230]IDSIDISKK | LFPQKIYFLKIFTQDCCENKIDSIDISKKKYIFKK |
VLDLR-AS1:1 | CCRC | 12 | 0.959996 | coding | 86 | chr9 | 2535656 | 2643359 | - | 0.9961 | VLDLR-AS1 | 1 | 3.069 | 0.698 | 10.524 | 4 | noncoding | -0.290569733 | VHIWLFSRFRWR | n[230]VHIWLFSRFRWR | LCTGIGRVHIWLFSRFRWRRSPGAPSTARAAARAPRARTCPWCPPGWCRRRRRRRRSLRTTSYQSFRKEEEGSKLDIEDYHMNQKG |
VLDLR-AS1:13 | OV | 13 | 0.366769 | noncoding | 128 | chr9 | 2496115 | 2622387 | - | 0.8709 | VLDLR-AS1 | 1 | 4.827 | 2.077 | 6.381 | 14 | noncoding | -0.26463466 | LDGAAAAAAAAVR | n[145]LDGAAAAAAAAVR | LGPARRRRGASSLTGSGGAALPGRPAQREQQPERPERGRAHGARLDGAAAAAAAAVRSARQVTSPSERRKKVGAGRGKGEKEGKELAGEGSGEEEGTPSPTTCTVSSPPTQPPPRAAAAVQAEPAGRK |
VLDLR-AS1:13 | OV | 24 | 0.366769 | noncoding | 128 | chr9 | 2496115 | 2622387 | - | 0.5395 | VLDLR-AS1 | 1 | 2.811 | 2.077 | 0 | 6 | noncoding | -0.26463466 | RPESGVSSGEGAGGGVVNGRRGGR | n[145]RPESGVSSGEGAGGGVVNGRRGGR | LHSLLPTHPATSPGCSSSASRACGQKIMQALQRRGGKGRGGKGEGVGSREQKRAQNGEEPVAEHPHRRRPESGVSSGEGAGGGVVNGRRGGRAGARRLRPSFPSTRSSCTRRAAGCPRGERASVSVRE |
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