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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ZSCAN10-3:46 | OV | 9 | 0.218847 | noncoding | 35 | chr16 | 3106838 | 3112508 | - | 0.1155 | lnc-ZSCAN10-3 | 0.169 | 0 | 0 | 0 | 1 | noncoding | -0.383168968 | KELTIIGAR | n[145]KELTIIGAR | LHSSLGNKSETPSQKKKKKKKELTIIGARHSGSRL |
lnc-ZSCAN10-7:1 | BRCA-Basal-like | 8 | 0.33039 | noncoding | 104 | chr16 | 3140921 | 3150540 | - | 0.2454 | lnc-ZSCAN10-7 | 0.364 | -5.033 | -4.643 | -4.743 | 1 | noncoding | -0.252594873 | GWWEGQAR | n[145]GWWEGQAR | LTTHPPALGGSRPGAPGREKLDVRGWWEGQARCQPLLQGTQPGAALSSRSPTRSKRVPPLTKQRLWALLPFTVVGEEWPGEDPESCSAPRSAGAPTVLPEQGRH |
lnc-ZSCAN10-7:1 | BRCA-Luminal A | 13 | 0.33039 | noncoding | 104 | chr16 | 3140921 | 3150540 | - | 0.9992 | lnc-ZSCAN10-7 | 0.364 | -5.033 | -4.643 | -4.743 | 3 | noncoding | -0.252594873 | SAGAPTVLPEQGR | n[145]SAGAPTVLPEQGR | LTTHPPALGGSRPGAPGREKLDVRGWWEGQARCQPLLQGTQPGAALSSRSPTRSKRVPPLTKQRLWALLPFTVVGEEWPGEDPESCSAPRSAGAPTVLPEQGRH |
lnc-ZSCAN10-7:1 | BRCA-HER2-enriched | 13 | 0.33039 | noncoding | 104 | chr16 | 3140921 | 3150540 | - | 0.9992 | lnc-ZSCAN10-7 | 0.364 | -5.033 | -4.643 | -4.743 | 3 | noncoding | -0.252594873 | SAGAPTVLPEQGR | n[145]SAGAPTVLPEQGR | LTTHPPALGGSRPGAPGREKLDVRGWWEGQARCQPLLQGTQPGAALSSRSPTRSKRVPPLTKQRLWALLPFTVVGEEWPGEDPESCSAPRSAGAPTVLPEQGRH |
lnc-ZSCAN10-7:1 | BRCA-Luminal B | 13 | 0.33039 | noncoding | 104 | chr16 | 3140921 | 3150540 | - | 0.9992 | lnc-ZSCAN10-7 | 0.364 | -5.033 | -4.643 | -4.743 | 3 | noncoding | -0.252594873 | SAGAPTVLPEQGR | n[145]SAGAPTVLPEQGR | LTTHPPALGGSRPGAPGREKLDVRGWWEGQARCQPLLQGTQPGAALSSRSPTRSKRVPPLTKQRLWALLPFTVVGEEWPGEDPESCSAPRSAGAPTVLPEQGRH |
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