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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAV3-AS1:4 | BRCA-Luminal A | 21 | 0.0945516 | noncoding | 41 | chr1 | 107964054 | 108006089 | + | 0.9972 | VAV3-AS1 | 0.019 | 0 | 0 | 0 | 24 | noncoding | -0.337422049 | TYNPSTFGGRGGQITQGQEIK | n[145]TYNPSTFGGRGGQITQGQEIK | LGLGAGARTYNPSTFGGRGGQITQGQEIKNSLPNMVKPRLH |
VAV3-AS1:4 | BRCA-Basal-like | 21 | 0.0945516 | noncoding | 41 | chr1 | 107964054 | 108006089 | + | 0.9972 | VAV3-AS1 | 0.019 | 0 | 0 | 0 | 24 | noncoding | -0.337422049 | TYNPSTFGGRGGQITQGQEIK | n[145]TYNPSTFGGRGGQITQGQEIK | LGLGAGARTYNPSTFGGRGGQITQGQEIKNSLPNMVKPRLH |
VAV3-AS1:4 | HCC | 7 | 0.0945516 | noncoding | 93 | chr1 | 107964054 | 108006089 | + | 0.9977 | VAV3-AS1 | 0.997 | -0.054 | -1.841 | -3.753 | 108 | noncoding | -0.337422049 | VGEGHPK | n[230]VGEGHPK | MSTRRKAKEETKGKLPHHLVSSLPFVIIEELDQIPFVAPHTRRVGEGHPKTTYFFPASQKAFTKSSHHLRTQSFRIQLEELNHFKPRFLHRLG |
VAV3-AS1:4 | HCC | 7 | 0.0945516 | noncoding | 93 | chr1 | 107964054 | 108006089 | + | 0.9977 | VAV3-AS1 | 0.997 | -0.054 | -1.841 | -3.753 | 108 | noncoding | -0.337422049 | VGEGHPK | VGEGHPK | MSTRRKAKEETKGKLPHHLVSSLPFVIIEELDQIPFVAPHTRRVGEGHPKTTYFFPASQKAFTKSSHHLRTQSFRIQLEELNHFKPRFLHRLG |
VAV3-AS1:4 | OSCC | 18 | 0.0945516 | noncoding | 71 | chr1 | 107964054 | 108006089 | + | 0.975 | VAV3-AS1 | 0.941 | -4.759 | -3.209 | -5.356 | 8 | noncoding | -0.337422049 | MFYDTILTFISITYLLGR | n[145]MFYDTILTFISITYLLGR | MFYDTILTFISITYLLGRVITKKDSVISKELTRGNLTFTQQSKVAKGNNNGQYEQGTTGFPKNHLIFSLFQ |
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