top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
USP46-AS1:4 | OV | 22 | 0.106998 | noncoding | 49 | chr4 | 52659429 | 52666359 | + | 0.8669 | USP46-AS1 | 0.16 | 0 | 0 | 0 | 2 | noncoding | -0.302324673 | MIDLPAACILHLEKPQALNCSP | n[145]M[147]IDLPAACILHLEKPQALNCSP | LEAPTGSPLGHCLMELYEVGHCPPDLRMIDLPAACILHLEKPQALNCSP |
UVRAG-DT:19 | PRAD | 28 | 0.0320498 | noncoding | 43 | chr11 | 75800876 | 75814777 | - | 0.9569 | UVRAG-DT | 0.62 | -5.39 | -5.569 | -5.524 | 7 | noncoding | -0.33916508 | HLTHCLGDSTFLINTSCHYFHMSYFILK | HLTHCLGDSTFLINTSCHYFHM[147]SYFILK | LQSIQDDVKHLTHCLGDSTFLINTSCHYFHMSYFILKTFLSCF |
UVRAG-DT:21 | BRCA-Basal-like | 8 | 0.0596487 | noncoding | 37 | chr11 | 75800876 | 75814777 | - | 0.9481 | UVRAG-DT | 0.116 | -4.188 | -4.888 | -3.351 | 9 | noncoding | -0.319131265 | RWHLVIAR | n[145]RWHLVIAR | LNRKELEKRWHLVIARVTAGQASAFLVELRPGAGNTA |
UVRAG-DT:21 | BRCA-HER2-enriched | 8 | 0.0596487 | noncoding | 37 | chr11 | 75800876 | 75814777 | - | 0.9481 | UVRAG-DT | 0.116 | -4.188 | -4.888 | -3.351 | 9 | noncoding | -0.319131265 | RWHLVIAR | n[145]RWHLVIAR | LNRKELEKRWHLVIARVTAGQASAFLVELRPGAGNTA |
UVRAG-DT:21 | BRCA-Luminal B | 8 | 0.0596487 | noncoding | 37 | chr11 | 75800876 | 75814777 | - | 0.9481 | UVRAG-DT | 0.116 | -4.188 | -4.888 | -3.351 | 9 | noncoding | -0.319131265 | RWHLVIAR | n[145]RWHLVIAR | LNRKELEKRWHLVIARVTAGQASAFLVELRPGAGNTA |
Page 1 of 1
bottom of page