top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MAGI1-IT1:2 | HCC | 7 | 0.0789023 | noncoding | 97 | chr3 | 65951768 | 65954554 | - | 0.9971 | MAGI1-IT1 | 1 | -3.435 | -3.889 | -3.368 | 24 | noncoding | -0.33137161 | SQAGEVK | n[230]SQAGEVK | LICSVEERMWPCTPASLDTPVGLVSLLKPPCGALDTGAIGSALATVSTETGLGGTQVSVSFSCWLNPKYVCNRSQAGEVKLKPGLSLGLDSPVAYFR |
MAGI2-AS3:11 | CRC | 18 | 0.0213012 | noncoding | 82 | chr7 | 79453677 | 79455051 | + | 0.759 | MAGI2-AS3 | 1 | 1.404 | -0.061 | 1.528 | 1 | noncoding | -0.327443674 | RASPLPPSLPPQLDPVVK | LQWQGACACVCVCVCVLVLLYWQTGGGRGGGARAPGGEPRRASPLPPSLPPQLDPVVKAEREAGWVRLAAYGRRREPGRRGA | |
MALINC1:40 | EOGC | 15 | 0.988929 | coding | 318 | chr5 | 140101467 | 140114769 | - | 0.1154 | MALINC1 | 1 | 3.444 | 1.126 | 1.074 | 3 | coding | 0.689991029 | AGAVLPQVREGAGWR | n[145]AGAVLPQVREGAGWR | LGALQPKFRFMADILVGCLPLQTSQPASGAHRRSQRRPLSFTSVPFALGQRQRSCGADPALWGSKNALFGPPIFGPGFICDVSTKGFFFFFPGFVLFLQRILGGCMHLVVVGWGEPNRGGVGSEAWVIELSFLSLLPGLPCRECQPRLAHSPRPQGEGGQGKWGSGIAKQTHHWWSPAPAEVGSPLFLRGVLFCSLLKVGGGSFVSRCGGWERTLLHRLGLQEGGCGDVCNGTIIIPGLREQVKGTGRASPGAVAVAAGKVARGLPGRAGAVLPQVREGAGWREGGRARDRREEGGRGGGRARAHLSWTAALAELRLT |
MALINC1:40 | EOGC | 7 | 0.988929 | coding | 318 | chr5 | 140101467 | 140114769 | - | 0.9864 | MALINC1 | 1 | 3.444 | 1.126 | 1.074 | 85 | coding | 0.689991029 | LGALQPK | n[145]LGALQPK | LGALQPKFRFMADILVGCLPLQTSQPASGAHRRSQRRPLSFTSVPFALGQRQRSCGADPALWGSKNALFGPPIFGPGFICDVSTKGFFFFFPGFVLFLQRILGGCMHLVVVGWGEPNRGGVGSEAWVIELSFLSLLPGLPCRECQPRLAHSPRPQGEGGQGKWGSGIAKQTHHWWSPAPAEVGSPLFLRGVLFCSLLKVGGGSFVSRCGGWERTLLHRLGLQEGGCGDVCNGTIIIPGLREQVKGTGRASPGAVAVAAGKVARGLPGRAGAVLPQVREGAGWREGGRARDRREEGGRGGGRARAHLSWTAALAELRLT |
MALINC1:40 | HCC | 20 | 0.988929 | coding | 318 | chr5 | 140101467 | 140114769 | - | 0.8622 | MALINC1 | 1 | 3.444 | 1.126 | 1.074 | 37 | coding | 0.689991029 | EQVKGTGRASPGAVAVAAGK | EQVKGTGRASPGAVAVAAGK | LGALQPKFRFMADILVGCLPLQTSQPASGAHRRSQRRPLSFTSVPFALGQRQRSCGADPALWGSKNALFGPPIFGPGFICDVSTKGFFFFFPGFVLFLQRILGGCMHLVVVGWGEPNRGGVGSEAWVIELSFLSLLPGLPCRECQPRLAHSPRPQGEGGQGKWGSGIAKQTHHWWSPAPAEVGSPLFLRGVLFCSLLKVGGGSFVSRCGGWERTLLHRLGLQEGGCGDVCNGTIIIPGLREQVKGTGRASPGAVAVAAGKVARGLPGRAGAVLPQVREGAGWREGGRARDRREEGGRGGGRARAHLSWTAALAELRLT |
Page 1 of 1
bottom of page