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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
MIR155HG:8
BRCA-Luminal B
10
0.0257215
noncoding
131
chr21
25562130
25575086
+
0.9783
MIR155HG
1
-0.687
-0.628
-1.425
3
coding
0.696585178
VTAGLTGEAR
n[145]VTAGLTGEAR
LCAAEPGPSAACSLGKGADSGAPSRPQSKRGEPRRRSWHCRYADFSLALPPAFPLLNVAGTPGDFGARVTAGLTGEARRGQRARGRGARPGPARACGCPLGTQWCRLARDQRLRWMDSRGQRQGEGGVFET
MIR155HG:8
BRCA-Luminal A
10
0.0257215
noncoding
131
chr21
25562130
25575086
+
0.9783
MIR155HG
1
-0.687
-0.628
-1.425
3
coding
0.696585178
VTAGLTGEAR
n[145]VTAGLTGEAR
LCAAEPGPSAACSLGKGADSGAPSRPQSKRGEPRRRSWHCRYADFSLALPPAFPLLNVAGTPGDFGARVTAGLTGEARRGQRARGRGARPGPARACGCPLGTQWCRLARDQRLRWMDSRGQRQGEGGVFET
MIR155HG:8
OV
10
0.0257215
noncoding
131
chr21
25562130
25575086
+
0.9331
MIR155HG
1
-0.687
-0.628
-1.425
5
coding
0.696585178
VTAGLTGEAR
n[145]VTAGLTGEAR
LCAAEPGPSAACSLGKGADSGAPSRPQSKRGEPRRRSWHCRYADFSLALPPAFPLLNVAGTPGDFGARVTAGLTGEARRGQRARGRGARPGPARACGCPLGTQWCRLARDQRLRWMDSRGQRQGEGGVFET
MIR155HG:8
OV
14
0.0257215
noncoding
131
chr21
25562130
25575086
+
0.1266
MIR155HG
1
-0.687
-0.628
-1.425
1
coding
0.696585178
VTAGLTGEARRGQR
n[145]VTAGLTGEARRGQR
LCAAEPGPSAACSLGKGADSGAPSRPQSKRGEPRRRSWHCRYADFSLALPPAFPLLNVAGTPGDFGARVTAGLTGEARRGQRARGRGARPGPARACGCPLGTQWCRLARDQRLRWMDSRGQRQGEGGVFET
MIR17HG:13
OSCC
15
0.216464
noncoding
88
chr13
91347686
91360201
+
0.8362
MIR17HG
1
4.558
0.938
0.783
8
coding
0.775165067
AGRPHPRPGASGRSK
n[145]AGRPHPRPGASGRSK
MVLRGAAAAARPAPSRHFAPSGEAEGVGTTTAAPPGLALLREALLAGRAGRPHPRPGASGRSKAQAGGEAGAGARGRPAEDGGGYSSW
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