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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
MINCR:1
LUAD
8
0.150069
noncoding
101
chr8
143280832
143281929
-
0.999
MINCR
0.304
0
0
0
33
noncoding
-0.326387247
ALPSAAAK
n[230]ALPSAAAK
LRRREGHTLSGLLPVFSSGFRSVWCPGRVSSELCCFAPARALPSAAAKTGARVPNFAEELHRPPARDLRPQPSTPRLGDLSPPSGPAHHESGPVLGAGMKQ
MIR1-1HG-AS1:3
OV
11
0.129801
noncoding
80
chr20
62543069
62551561
-
0.8138
MIR1-1HG-AS1
0.023
-3.953
-4.303
-4.679
2
noncoding
-0.259260471
FISLLGLQENK
n[145]FISLLGLQENK
LWAQCPHRVLRRGGGRVRVRGSLEDIAQMALKEGPRVKAREPPDPGEGRTRILPRASSSQPFQHMDFRFISLLGLQENKL
MIR1-1HG-AS1:3
OV
14
0.129801
noncoding
80
chr20
62543069
62551561
-
0.2839
MIR1-1HG-AS1
0.023
-3.953
-4.303
-4.679
2
noncoding
-0.259260471
VRGSLEDIAQMALK
n[145]VRGSLEDIAQMALK
LWAQCPHRVLRRGGGRVRVRGSLEDIAQMALKEGPRVKAREPPDPGEGRTRILPRASSSQPFQHMDFRFISLLGLQENKL
MIR1-1HG-AS1:32
OV
17
0.144945
noncoding
58
chr20
62544342
62551526
-
0.9623
MIR1-1HG-AS1
0.067
-4.094
-4.513
-3.478
1
noncoding
-0.259260471
AEGGASPVPAPSITVPR
n[145]AEGGASPVPAPSITVPR
LSRGGPCHPQFLGIPAPAGRAEGGASPVPAPSITVPRWRGRPFRAWAWVWMRAGLSPL
MIR1-1HG-AS1:32
OV
19
0.144945
noncoding
58
chr20
62544342
62551526
-
0.4594
MIR1-1HG-AS1
0.067
-4.094
-4.513
-3.478
1
noncoding
-0.259260471
AEGGASPVPAPSITVPRWR
n[145]AEGGASPVPAPSITVPRWR
LSRGGPCHPQFLGIPAPAGRAEGGASPVPAPSITVPRWRGRPFRAWAWVWMRAGLSPL
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