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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
NEAT1:1
OV
30
0.593774
coding
93
chr11
65418471
65450093
+
0.7309
NEAT1
0.846
-4.176
-3.877
0
1
noncoding
-0.270580375
AGPVITFMGLQLTWELPSSVSPQIFTQSLR
n[145]AGPVITFM[147]GLQLTWELPSSVSPQIFTQSLR
LSFFPLLPPDLGPHRAGPVITFMGLQLTWELPSSVSPQIFTQSLRVLSDLYKTKCRVTCQGTAIPGKTDRNPSLEEIKLGRRFRVVVRRLAEW
NEAT1:1
OV
8
0.593774
coding
93
chr11
65418471
65450093
+
0.9258
NEAT1
0.846
-4.176
-3.877
0
3
noncoding
-0.270580375
NPSLEEIK
n[145]NPSLEEIK
LSFFPLLPPDLGPHRAGPVITFMGLQLTWELPSSVSPQIFTQSLRVLSDLYKTKCRVTCQGTAIPGKTDRNPSLEEIKLGRRFRVVVRRLAEW
NEAT1:1
OV
11
0.593774
coding
251
chr11
65418471
65450093
+
0.8087
NEAT1
1
2.105
-1.826
1.07
34
noncoding
-0.270580375
TTMPAPEAPAR
n[145]TTM[147]PAPEAPAR
MFYPGRDAHSQETRPLARPLGRVKTTMPAPEAPARLHGAPCCHPLAPGRYQPAAGFPGQRNRLLGCGAFHVPSQHPAGLLGRPAPNPRPGADVIGRARLGTTARKSRAPPGGTCPLQRSLRRRLEFSRCPAGPSFGPRLGVVTSSDPGGSRRPLKRAPPPATPPAPLGEARPPPDLNNIREEKGSSSSWHSPPKCHLERCPRSQKALLKRSGDTLGSLRGGRLGDHAPPGSLSGQGRGGTFLPVAVEESSR
NEAT1:1
OV
9
0.593774
coding
93
chr11
65418471
65450093
+
0.0839
NEAT1
0.846
-4.176
-3.877
0
1
noncoding
-0.270580375
VLSDLYKTK
n[145]VLSDLYKTK
LSFFPLLPPDLGPHRAGPVITFMGLQLTWELPSSVSPQIFTQSLRVLSDLYKTKCRVTCQGTAIPGKTDRNPSLEEIKLGRRFRVVVRRLAEW
NEAT1:3
CRC
12
0.0497582
noncoding
75
chr11
65422773
65424761
+
0.8255
NEAT1
1
-3.207
-0.386
0.12
1
noncoding
-0.331380967
FADELMGGNLKK
FADELM[147]GGNLKK
LQEGRPWRREPASIDACRLNFQRLRRRKFSNVLFPGLAQEALYSGGYHLKFADELMGGNLKKSTADASGSRGHQL
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