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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NGF-AS1:6 | BRCA-Basal-like | 11 | 0.120316 | noncoding | 49 | chr1 | 115280316 | 115367013 | + | 0.9968 | NGF-AS1 | 0.994 | 0 | -5.168 | -4.634 | 9 | noncoding | -0.335781295 | DSLQAAVVEGR | n[145]DSLQAAVVEGR | LGWRDSLQAAVVEGRFAQLTLGAGPPEPSSHTQEDGSEEARTGKSDPPL |
NGF-AS1:6 | BRCA-Luminal B | 11 | 0.120316 | noncoding | 49 | chr1 | 115280316 | 115367013 | + | 0.9968 | NGF-AS1 | 0.994 | 0 | -5.168 | -4.634 | 9 | noncoding | -0.335781295 | DSLQAAVVEGR | n[145]DSLQAAVVEGR | LGWRDSLQAAVVEGRFAQLTLGAGPPEPSSHTQEDGSEEARTGKSDPPL |
NGF-AS1:6 | BRCA-HER2-enriched | 15 | 0.120316 | noncoding | 49 | chr1 | 115280316 | 115367013 | + | 0.088 | NGF-AS1 | 0.994 | 0 | -5.168 | -4.634 | 1 | noncoding | -0.335781295 | LGWRDSLQAAVVEGR | n[145]LGWRDSLQAAVVEGR | LGWRDSLQAAVVEGRFAQLTLGAGPPEPSSHTQEDGSEEARTGKSDPPL |
NIFK-AS1:19 | OSCC | 17 | 0.0618205 | noncoding | 114 | chr2 | 121649647 | 121655196 | + | 0.4245 | NIFK-AS1 | 0.65 | 0 | 0 | 0 | 2 | noncoding | -0.369453093 | HSNMMKELFWVCLVFFR | n[145]HSNM[147]MKELFWVCLVFFR | LRQEKCLNPGSGGCGERKLRRRTQAGRQRDSVSKISINRMWEILKPSIEIHTLYCLRSVTRHSNMMKELFWVCLVFFRDRVSLCCPGWRAVVRSRLTATSASLVEAILFPQPPE |
NIFK-AS1:19 | OSCC | 10 | 0.0618205 | noncoding | 114 | chr2 | 121649647 | 121655196 | + | 0.8279 | NIFK-AS1 | 0.65 | 0 | 0 | 0 | 1 | noncoding | -0.369453093 | SVTRHSNMMK | n[145]SVTRHSNM[147]M[147]K | LRQEKCLNPGSGGCGERKLRRRTQAGRQRDSVSKISINRMWEILKPSIEIHTLYCLRSVTRHSNMMKELFWVCLVFFRDRVSLCCPGWRAVVRSRLTATSASLVEAILFPQPPE |
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