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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PCA3:5 | OV | 9 | 0.0663004 | noncoding | 36 | chr9 | 76692286 | 76760032 | + | 0.827 | PCA3 | 0.032 | 0 | 0 | 0 | 3 | noncoding | -0.328113807 | GLSTQLPNR | n[145]GLSTQLPNR | MLPRGRSPEALALAPAPAHLRAPPPIRGLSTQLPNR |
PCA3:5 | OV | 15 | 0.0663004 | noncoding | 44 | chr9 | 76692286 | 76760032 | + | 0.8928 | PCA3 | 0.15 | 0 | 0 | 0 | 3 | noncoding | -0.328113807 | LSSNDLPASASQSAR | n[145]LSSNDLPASASQSAR | LSSNDLPASASQSARTTGMSHSTWPYELCTISEFWKTESPRSRS |
PCA3:5 | OV | 15 | 0.0663004 | noncoding | 36 | chr9 | 76692286 | 76760032 | + | 0.9182 | PCA3 | 0.032 | 0 | 0 | 0 | 2 | noncoding | -0.328113807 | SPEALALAPAPAHLR | n[145]SPEALALAPAPAHLR | MLPRGRSPEALALAPAPAHLRAPPPIRGLSTQLPNR |
PCAT1:38 | OV | 10 | 0.0480529 | noncoding | 33 | chr8 | 126973234 | 127064895 | + | 0.9017 | PCAT1 | 0.966 | -3.62 | -5.096 | -3.475 | 26 | noncoding | -0.373066624 | MYSFVVLEVK | n[145]M[147]YSFVVLEVK | MYSFVVLEVKKFEIKVSARSSHLLGCTRFSSTA |
PCAT1:4 | OV | 7 | 0.653143 | coding | 39 | chr8 | 127013153 | 127021014 | + | 0.9625 | PCAT1 | 0.67 | -4.742 | -5.238 | -5.201 | 10 | noncoding | -0.342647866 | DIGYLHR | n[145]DIGYLHR | MDIGYLHRQLAPRRCLPVQMGRKGKWQGGRESICTLTIW |
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