top of page
CircRNA Peptides
Use criteria below to search among 3,238 unique circRNA peptides:
*Click CircRNA to view full amino acid sequences spanning backsplice junctions and comprehensive information in new page.
CircRNA* | Cancer | Peptide | Type of Peptide | Highest Probability Peptide Matching Spectra | No. of Amino Acids from 5' Exons | No. of Amino Acids from 3' Exons | No. of Spectra | Amino Acids from 5' Exons | Amino Acids from 3' Exons |
|---|---|---|---|---|---|---|---|---|---|
chr6|43625755|43626410|-|GTPBP2|ENST00000307114.11 | HCC | VPDNQQLK | junction_peptide | 0.9556 | 6 | 2 | 2 | GWGRHNRSSRARSGLRHAPEDHRGASTKGPQPT,VGADITVLREREVDYDSDMPRKITEVLVRKVPDNQQ,LGQTPFFESEKWIMIATCPGRSPRCYERSLTTN | LKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAE,SWIHPSTALSTWHKSGGSRRDVVRPSTRLGRTMGCWWGWLRRKCELRSRPCTGWQR,EAGESIPVPLAPGDTNEVAAPGGTWGRLPDWGRGQWAAGGAGGGNASFAQDPAPDGRE |
chr11|108271063|108304852|+|ATM|ENST00000278616.8 | HCC | VPLANGR | junction_peptide | 0.999 | 4 | 3 | 9 | YLMLLKELPGEEYPLPMEDVLELLKPL,ICFRSFLEKSTPCQWKMFLNFNHY,SNAFKGASWRRVPLANGRCSTSETTI | VKTDFCQTVLPYLIHDILLQDTNESWRNLLSTHVQGFFTSCLRHFSQTSRSTTPANLDS,KLTFVRLYFHTFMIFYSKIQMNHGEICFLHMFRDFSPAVFDTSRKRADPQPLQTWIQ,ENLLSDCTSILDSYFTPRYKIMEKSAFYTCSGIFHQLSSTLLANEPIHNPCKLGF |
chr14|101786017|101856885|+|PPP2R5C|ENST00000328724.9 | HCC | VPVSQPIVK | noncanonical_peptide | 1 | 7 | 2 | 18 | QISVRKNSLVAVPSTVSAKIKVPVSQPIVKKDKRQNSSRFSASNNRELQKLPSLK,KFPSGKTALLLSRLQYLLKKYQSLSPRKTNGKILQGLAQAIIENFKNYHPK,NFRQEKQPCCCPVYSICNKSTSLSAHSEERQTAKFFKVRKQRTSKTTILK | MFLLLIKRSFLSRSYVSVASSLTLFLIHVTSGRKNELLVKWNISPIIGMSQSLFTQKSI,CSSCSREAFYPEVTSVLRPLLCFSTKPKVEGSKTSCFKNGRIYHPSECDHRAYLPRSSPY,VPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHM |
chr11|16786228|16795018|-|PLEKHA7|ENST00000531066.5 | HCC | VQAMPVTELDLEPQDYDLDISR | noncanonical_peptide | 1 | 20 | 2 | 3 | WKREQDFDLQLLERVVQGEKKDKEENGWLKVQAMPVTELDLEPQDYDLDISRE,GSVSRTLTCSCWNGSCKGKKRTRRRMAGKCRPCLSLSWTWSLKTMTWTSAE,EAAGLPAVAGTGRARGKKGQGGEWLVESAGHACHVGPGASRLLGHQQR | EKSQIQKDLWRIEDVTAGLSANKENFRILVESVKNP,RNRRYRKIYGELKMSLQAVQIKRTSEFWSQKIR,EIADTERSMENRCHCRPECKRELQNSSGVSKKS |
chr6|75152332|75156523|-|COL12A1|ENST00000322507.12 | HCC | VQIVSQDSK | junction_peptide | 0.9987 | 4 | 5 | 6 | GWSVSPELRQTLCCWWMDHGASAGQILEPGVSFLVLWKSLTLAPKEYKL,DGVSHQSGRHCVAGGWIMEHRPGKFNREEFHFSYCGSLHWPQKSTN,MECLTRAEADIVLLVDGSWSIGRANFRTVRSFISRIVEVFDIGPKRVQI | YLKIPKPKMKKQKTQELHGNQHQGKSSTTVLSIALMGEGSKWLLRCPPQSLRQCSDFSHRPHMTSQFFLFTRWEKESLGKDQEQQ,ISRFQNPESRRNRKHNESYMETSTRESRQLPCCLSPSWEREANGCGAPHSHFDSVKATSATDHIHHSSSYLQDGRRKAARIRNN,SQDSKTLKVDEETENTMRVTWKPAPGKVVNYRVVYRPHGRGKQMVAKVPPTVTSTVLKRLQPQTTYDITVLPIYKMGEGKLRQGSGTT |
Page 1 of 1
bottom of page