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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr4|122239515|122266958|+|18|circRNA|KIAA1109|ENST00000264501.8|29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46 | circKIAA1109(29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46) | KIAA1109 | LVHSHIHHQQTLIHFISIDQWIPACQWLIVKPTFLLLRNLSPLAVMKALELIRVEKRRKSKPSRLTTVGVPYITV | LTTVGVPYITV | No | Alternative | Alternative | 11 | 2 | TTG | TAG | TransCirc | No |
chr4|122262763|122266958|+|4|circRNA|KIAA1109|ENST00000264501.8|43,44,45,46 | circKIAA1109(43,44,45,46) | KIAA1109 | LENTFHFQGLWTASEQILWIQTQPKREKAKEQEGHSPISFSELYQWRHCH | AKEQEGHSPISFSELYQWR | No | Junction | Junction | 19 | 2 | TTG | TGA | TransCirc | No |
chr4|122262763|122266958|+|4|circRNA|KIAA1109|ENST00000264501.8|43,44,45,46 | circKIAA1109(43,44,45,46) | KIAA1109 | LENTFHFQGLWTASEQILWIQTQPKREKAKEQEGHSPISFSELYQWRHCH | EQEGHSPISFSELYQWR | No | Junction | Junction | 17 | 2 | TTG | TGA | TransCirc | No |
chr4|1238355|1241324|-|1|ciRNA|CTBP1|NM_001012614|2 | ciCTBP1(2) | CTBP1 | LPRIKSRDLGCMGVGPDCCHLTPGVLWARSGAPRGRASCTPGGRAQLWSGLSVASAVCFCRKVSERHGGPPCGGRQHEGGAPHGTLEISGVHPAGPGAGPWPLWSCSLWLVCALWPGSACSRKQPWAWGMLQSLLQHRPCDCEASWVCPQACKGGLSGEPWHGGQGQLMGDVRRHLGCLSLMGLGVSTCSPLPTVQLRDPVPTHPAPGSPPRGSDEGPGSHSPSTRESPTRFRRGTRFPLTQHPGVPHAVPTRDPVPTHPAPGSPPRGSDEGPGSHSPSTRESPTRFRRGTRFPLTQHPGVPHAVPTRDPVPTHPAPGSPPRRFRRGTRSHSPSTRECPTRFRRGTRFPLTQHPGVPHAVLTRDPVPTHPAPRSPPRRF | DPVPTHPAPGSPPR | No | Alternative | Alternative | 14 | 1 | CTG | TGA | NA | No |
chr4|1238355|1241324|-|1|ciRNA|CTBP1|NM_001012614|2 | ciCTBP1(2) | CTBP1 | LPRIKSRDLGCMGVGPDCCHLTPGVLWARSGAPRGRASCTPGGRAQLWSGLSVASAVCFCRKVSERHGGPPCGGRQHEGGAPHGTLEISGVHPAGPGAGPWPLWSCSLWLVCALWPGSACSRKQPWAWGMLQSLLQHRPCDCEASWVCPQACKGGLSGEPWHGGQGQLMGDVRRHLGCLSLMGLGVSTCSPLPTVQLRDPVPTHPAPGSPPRGSDEGPGSHSPSTRESPTRFRRGTRFPLTQHPGVPHAVPTRDPVPTHPAPGSPPRGSDEGPGSHSPSTRESPTRFRRGTRFPLTQHPGVPHAVPTRDPVPTHPAPGSPPRRFRRGTRSHSPSTRECPTRFRRGTRFPLTQHPGVPHAVLTRDPVPTHPAPRSPPRRF | GSDEGPGSHSPSTR | No | Alternative | Alternative | 14 | 1 | CTG | TGA | NA | No |
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