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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr11|20080063|20105727|+|11|circRNA|NAV2|ENST00000360655.8|25,26,27,28,29,30,31,32,33,34,35 | circNAV2(25,26,27,28,29,30,31,32,33,34,35) | NAV2 | LDSQGLASPQPLPGGSQFLGRHHRKRHCPVCRPPHPQAALLRQRLQHQQCHQPLQRGQQHRE | LDSQGLASPQPLPGGSQFLGR | No | Alternative | Junction | 21 | 1 | CTG | TGA | NA | No |
chr11|20080063|20114795|+|13|circRNA|NAV2|ENST00000360655.8|25,26,27,28,29,30,31,32,33,34,35,36,37 | circNAV2(25,26,27,28,29,30,31,32,33,34,35,36,37) | NAV2 | LRMSASTATPCLGRDRQASRCPPVMLKVTRWKRHCPVCRPPHPQAALLRQRLQHQQCHQPLQRGQQHRE | CPPVMLKVTR | No | Alternative | Junction | 10 | 2 | CTG | TGA | TransCirc | No |
chr11|20389743|20397721|+|5|circRNA|PRMT3|ENST00000331079.10|3,4,5,6,7 | circPRMT3(3,4,5,6,7) | PRMT3 | MSEPARHLLVSLRTSRRMRMVFISAHTGIMGYMKKC | MVFISAHTGIMGYMK | No | Alternative | Alternative | 15 | 3 | ATG | TAA | NA | No |
chr11|22221096|22227586|+|3|circRNA|ANO5|ENST00000324559.8|5,6,7 | circANO5(5,6,7) | ANO5 | LNILLHNSADIGRSSSSSKIRQPSFHPHQETEFFKKISKAKILSSSEMGLGKLILCFPTLMM | AKILSSSEMGLGK | No | Alternative | Junction | 13 | 2 | CTG | TAA | TransCirc | No |
chr11|22221096|22227586|+|3|circRNA|ANO5|ENST00000324559.8|5,6,7 | circANO5(5,6,7) | ANO5 | LNILLHNSADIGRSSSSSKIRQPSFHPHQETEFFKKISKAKILSSSEMGLGKLILCFPTLMM | ILSSSEMGLGK | No | Alternative | Junction | 11 | 2 | CTG | TAA | TransCirc | No |
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