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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr11|123729849|123730490|-|1|ciRNA|ZNF202|NM_001301819|1 | ciZNF202(1) | ZNF202 | LAGQLGKQAARRAAGGTGGDGKEPWVTGAQAGGGERAVQACASPALSWGG | LAGQLGK | No | Alternative | Alternative | 7 | 2 | CTG | TAA | NA | No |
chr11|123729849|123730490|-|1|ciRNA|ZNF202|NM_001301819|1 | ciZNF202(1) | ZNF202 | LTPWWWVRRGSPDLCDVEGDYLLEGWICGESLQDPHKLLVGSALGLLIYHEPHGLGGCVCMNVTFWILEHLYRDHLRGLSHQRVMALVFPSLNVEPWVPGEENFVTSSKVLIDPQSQIPLPGWSAREAGSKESCRWDRWRWEGTLGDRGPGWGW | GLSHQRVMALVFPSLNVEPWVPGEENFVTSSK | No | Alternative | Junction | 32 | 1 | CTG | TGA | NA | No |
chr11|124975095|124988134|+|4|circRNA|CCDC15|ENST00000529051.5|5,6,7,8 | circCCDC15(5,6,7,8) | CCDC15 | MFYSKTTVFSLKTRVFYSNIRTRTSYPETSMFSTKTKIFCQNIRTRIFYLRTRIFYLETSMFSPKTKIFCQNIRTRIFYLRTRIFCLETSMFSPKTRIFYLNIKARIFYLKTRTFYLETSMFSPKTGIFYPNVRTRIFYPETKVFFPKTKIFYPYVRTRIFYPETKVIFLKTKIFYPYVRTGIFYPETCMFSPTTRIFYPNVRTKIFYQNISLVKL | IFYLETSMFSPK | No | Alternative | Junction | 12 | 2 | ATG | TGA | TransCirc | No |
chr11|124986741|124988134|+|2|circRNA|CCDC15|ENST00000529051.5|7,8 | circCCDC15(7,8) | CCDC15 | MFYSKTTVFSLKTRVFYSNIRTRTSYPETSMFSTKTKIFCQNIRTRIFYLRTRIFYLETSMFSPKTKIFCQNIRTRIFYLRTRIFCLETSMFSPKTRIFYLNIKARIFYLKTRTFYLETSMFSPKTGIFYPNVRTRIFYPETKVFFPKTKIFYPYVRTRIFYPETKVIFLKTKIFYPYVRTGIFYPETCMFSPTTRIFYPNVRTKIFYQNIRNLTMRNLTMRNLHLL | IFYQNIR | No | Alternative | Junction | 7 | 2 | ATG | TAA | TransCirc | No |
chr11|124986741|124988134|+|2|circRNA|CCDC15|ENST00000529051.5|7,8 | circCCDC15(7,8) | CCDC15 | MFYSKTTVFSLKTRVFYSNIRTRTSYPETSMFSTKTKIFCQNIRTRIFYLRTRIFYLETSMFSPKTKIFCQNIRTRIFYLRTRIFCLETSMFSPKTRIFYLNIKARIFYLKTRTFYLETSMFSPKTGIFYPNVRTRIFYPETKVFFPKTKIFYPYVRTRIFYPETKVIFLKTKIFYPYVRTGIFYPETCMFSPTTRIFYPNVRTKIFYQNIRNLTMRNLTMRNLHLL | IFYQNIRNLTMR | No | Junction | Junction | 12 | 2 | ATG | TAA | TransCirc | No |
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