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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10|86467278|86500743|-|7|circRNA|WAPAL|NM_015045|9,8,7,6,5,4,3 | circWAPAL(9,8,7,6,5,4,3) | WAPAL | LSLCTAALMYILSRDRLNMDLDRASLDLMIRLLELEQDASSAKLLNEKDMNKIKEKIRRLCETVHNKHLDLENITIKWRIFMKNMKRIVTIFTKMLMTVLRNPMQKLQWLLKSRKQMILGTPSLGKGQNHHQKYLQSRDLLELVCLNGIMILKISDQKTVF | DLLELVCLNGIMILK | No | Alternative | Junction | 15 | 1 | CTG | TAA | TransCirc | No |
chr10|86890061|86900126|+|4|circRNA|BMPR1A|NM_004329|4,5,6,7 | circBMPR1A(4,5,6,7) | BMPR1A | MAGFAHFYGCLHNCYDHLLQLLLLQDRIWIVCFMALG | IWIVCFMALG | No | Alternative | Junction | 10 | 2 | ATG | TGA | TransCirc | No |
chr10|86890061|86900126|+|4|circRNA|BMPR1A|NM_004329|4,5,6,7 | circBMPR1A(4,5,6,7) | BMPR1A | MAGFAHFYGCLHNCYDHLLQLLLLQDRIWIVCFMALG | MAGFAHFYGCLHNCYDHLLQLLLLQDR | No | Junction | Junction | 27 | 2 | ATG | TGA | TransCirc | No |
chr10|86890061|86900126|+|4|circRNA|BMPR1A|NM_004329|4,5,6,7 | circBMPR1A(4,5,6,7) | BMPR1A | MAGFAHFYGCLHNCYDHLLQLLLLQDRIWIVCFMALG | MAGFAHFYGCLHNCYDHLLQLLLLQDRIWIVCFMALG | No | Junction | Junction | 37 | 2 | ATG | TGA | TransCirc | No |
chr10|86912239|86919469|+|3|circRNA|BMPR1A|NM_004329|8,9,10 | circBMPR1A(8,9,10) | BMPR1A | MGVAALLTWALLLNSTDIIARASQADVVTIVIWNRMKHLFQLENH | ASQADVVTIVIWNR | No | Alternative | Junction | 14 | 1 | ATG | TAA | TransCirc | No |
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