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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10|74838682|74843478|+|2|circRNA|KAT6B|NM_001256468|2,3 | circKAT6B(2,3) | KAT6B | LKRESAMRSVLPMGWIRRQSLNSWNSVFRMAQFSKSPTKALPPIRTQTTLGAFHQLNQALFLSQPRGLEDHVMISAMWIGINF | SVLPMGWIR | No | Alternative | Alternative | 9 | 2 | CTG | TAA | TransCirc | No |
chr10|74838682|75025249|+|16|circRNA|KAT6B|NM_001256468|2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17 | circKAT6B(2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17) | KAT6B | LGRKDKQRKRKEKTIIASRMLTLVEICLKTWIISIFVMDC | EKTIIASR | No | Alternative | Junction | 8 | 2 | CTG | TAA | TransCirc | No |
chr10|74969659|74985241|+|8|circRNA|KAT6B|ENST00000372725.5|4,5,6,7,8,9,10,11 | circKAT6B(4,5,6,7,8,9,10,11) | KAT6B | MMSSHSFFMSLQKMMKRAVIWLDTSLRTPILFEILS | MMSSHSFFMSLQK | No | Alternative | Junction | 13 | 2 | ATG | TGA | TransCirc | No |
chr10|76036007|76058783|+|3|circRNA|C10orf11|ENST00000611255.4|3,4,5 | circC10orf11(3,4,5) | C10orf11 | MLCSVQAAQLEISGCPESNQTRTRGGVGQRSLHEGGEAQGHWKD | TRGGVGQR | No | Alternative | Junction | 8 | 1 | ATG | TGA | TransCirc | No |
chr10|7769215|7780307|-|6|circRNA|KIN|ENST00000379562.8|8,7,6,5,4,3 | circKIN(8,7,6,5,4,3) | KIN | LGPSALKTIGSSASVKRKESSQSSTQSKEKKKKKSALDEIMEGIPK | SALDEIMEGIPK | No | Junction | Junction | 12 | 2 | CTG | TGA | TransCirc | No |
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