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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10|30026102|30029866|-|1|circRNA|KIAA1462|ENST00000375377.1|3 | circKIAA1462(3) | KIAA1462 | LQGSWALRWRWSPSCRASGERDRTSLLSPMQVPAPQSPPRKSCYLAQHRQMSPGCPLMPFMAGGSAAGPRALSL | TSLLSPMQVPAPQSPPR | No | Alternative | Alternative | 17 | 2 | CTG | TAG | NA | No |
chr10|30047531|30047871|-|1|circRNA|KIAA1462|ENST00000375377.1|2 | circKIAA1462(2) | KIAA1462 | MDTSCQETPQHHARITPRGARQRGLGHEQARACRTGMRMALRPSHIVRRPRGKDM | GLGHEQARACR | No | Alternative | Alternative | 11 | 1 | ATG | TGA | TransCirc | No |
chr10|30437175|30439274|+|2|circRNA|MAP3K8|ENST00000263056.5|2,3 | circMAP3K8(2,3) | MAP3K8 | MEYMSTGSDNKEEIDLLIKHLNVSDVIDIMENLYASEEPAVYEPSLMTMCQDSNQNDERSKSLLLSGQEVPWLSSVRYGTVEDLLAFANHISNTAKHFYGQRPQESGILLNMMQSSYREEARGIGSHILFADKKGS | GIGSHILFADK | No | Alternative | Junction | 11 | 3 | ATG | TAA | TransCirc | No |
chr10|31814258|31826385|-|4|circRNA|ARHGAP12|NM_001270699|10,9,8,7 | circARHGAP12(10,9,8,7) | ARHGAP12 | MIKKRNKRIPKSFVKELVVFLGGVAGFIFTFYQNSRK | ELVVFLGGVAGFIFTFYQNSRK | No | Alternative | Junction | 22 | 2 | ATG | TAG | NA | No |
chr10|31820386|31831800|-|3|circRNA|ARHGAP12|NM_001270699|8,7,6 | circARHGAP12(8,7,6) | ARHGAP12 | LAVISPNQSSQWTSRGQQLRWLQRINPAKRMYLRIKRNMDY | LAVISPNQSSQWTSR | No | Alternative | Junction | 15 | 2 | TTG | TAA | TransCirc | No |
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