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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8|67257731|67288065|-|11|circRNA|ARFGEF1|ENST00000262215.7|17,16,15,14,13,12,11,10,9,8,7 | circARFGEF1(17,16,15,14,13,12,11,10,9,8,7) | ARFGEF1 | LAYSIIMLTTDLHSPQHYLKMKCYMTEKTMIVRKSHKTLYRTL | LAYSIIMLTTDLHSPQHYLKMK | No | Junction | Junction | 22 | 2 | TTG | TAG | TransCirc | No |
chr8|690897|692612|-|2|circRNA|ERICH1|ENST00000524138.5|3,2 | circERICH1(3,2) | ERICH1 | MPRASPKHSLAAAEPMEPPGPSGARGQEKQGWDPSLSDPPRSVWEHGTQEGRAFELFWLQF | ASPKHSLAAAEPMEPPGPSGAR | No | Alternative | Alternative | 22 | 3 | ATG | TAA | NA | No |
chr8|69563538|69576209|+|3|circRNA|SULF1|ENST00000260128.8|4,5,6 | circSULF1(4,5,6) | SULF1 | MCTITMSTPTTRTALPPRGRPCMSLGLLLYILTTLATEQDPICRCSEYL | MCTITMSTPTTR | No | Alternative | Junction | 12 | 1 | ATG | TGA | TransCirc | No |
chr8|70123883|70162854|-|13|circRNA|NCOA2|ENST00000452400.6|21,20,19,18,17,16,15,14,13,12,11,10,9 | circNCOA2(21,20,19,18,17,16,15,14,13,12,11,10,9) | NCOA2 | MFSQQSPPHFGQQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQARSRLWIPAP | SRLWIPAP | No | Alternative | Junction | 8 | 2 | ATG | TGA | TransCirc | No |
chr8|70127089|70128432|-|1|ciRNA|NCOA2|ENST00000452400.6|18 | ciNCOA2(18) | NCOA2 | LGSLPFIHPAFPPSPPSTSDSVSVRSYQALSSLSPFPPASAQPFVKCTTSPFVPVILFLYRLECHLNETLNYHPQGLYYSLLIERTVLF | SYQALSSLSPFPPASAQPFVK | No | Alternative | Alternative | 21 | 2 | CTG | TGA | NA | No |
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