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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8|61525976|61548208|-|2|circRNA|ASPH|NM_001164750|22,21 | circASPH(22,21) | ASPH | LEPVHAVAARHISGMSLGTREDTLHLSGNAHSTM | LEPVHAVAAR | No | Alternative | Junction | 10 | 3 | CTG | TGA | TransCirc | No |
chr8|61548070|61556022|-|3|circRNA|ASPH|NM_001164750|21,20,19 | circASPH(21,20,19) | ASPH | LATLTLQCEWTESTALVDPKRNGLHRVSKGAECDT | LATLTLQCEWTESTALVDPK | No | Alternative | Junction | 20 | 3 | CTG | TAA | TransCirc | No |
chr8|61548070|61556022|-|3|circRNA|ASPH|NM_001164750|21,20,19 | circASPH(21,20,19) | ASPH | LATLTLQCEWTESTALVDPKRNGLHRVSKGAECDT | LATLTLQCEWTESTALVDPKR | No | Alternative | Junction | 21 | 3 | CTG | TAA | TransCirc | No |
chr8|61555923|61646878|-|14|circRNA|ASPH|NM_001164750|19,18,17,16,15,14,13,12,11,10,9,8,7,6 | circASPH(19,18,17,16,15,14,13,12,11,10,9,8,7,6) | ASPH | LSVTPNDGFAKVHYGFILKAQNKIAESIPYLKLREKTCNKKMDPQENHNKRMMSFLWRLM | RMMSFLWR | No | Alternative | Junction | 8 | 1 | CTG | TAG | TransCirc | No |
chr8|61651049|61684188|-|4|circRNA|ASPH|NM_001164750|5,4,3,2 | circASPH(5,4,3,2) | ASPH | MKQKNKFSPFSMKWYTQNMRQSMEDTRMGGKADSQELHSSRGLW | FSPFSMKWYTQNMR | No | Junction | Junction | 14 | 1 | ATG | TGA | TransCirc | No |
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