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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr1|223798214|223798677|-|1|circRNA|TP53BP2|NM_001031685|12 | circTP53BP2(12) | TP53BP2 | LQIKMWLKYHLLFLQNQNRLICLILDKLISHLQTLSQTEVLSSCQQLFRPWELNQNQQGSSRECCYLPAYLRLAKTRPFLQVLSKKVHLLLPSGPLLPSLPKTPYFHPSENPRPWQQVQYIPCIRNSRRQEKTSSRLCRAR | LICLILDK | No | Alternative | Alternative | 8 | 2 | TTG | TGA | TransCirc | No |
chr1|224189576|224190319|+|1|circRNA|DEGS1|ENST00000415210.5|2 | circDEGS1(2) | DEGS1 | MDYNYDGSHPVGCILHSKRLGLEMGHIWGLCVWQLH | MDYNYDGSHPVGCILHSK | No | Alternative | Alternative | 18 | 1 | ATG | TAA | TransCirc | No |
chr1|224404429|224413335|-|3|circRNA|WDR26|ENST00000486652.5|9,8,7 | circWDR26(9,8,7).A | WDR26 | LLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELTKCNSKLLIGKRSKEDRVSRYT | CNSKLLIGK | No | Alternative | Junction | 9 | 1 | CTG | TAA | NA | No |
chr1|22489879|22490645|+|1|circRNA|ZBTB40|ENST00000374651.8|2 | circZBTB40(2) | ZBTB40 | LQKSSDQPCKLLGSGSGGKGCLCAILRDIQKGTREASSRNPFI | LLGSGSGGKGCLCAILR | No | Alternative | Alternative | 17 | 1 | CTG | TGA | TransCirc | No |
chr1|22508000|22524444|+|11|circRNA|ZBTB40|ENST00000374651.8|5,6,7,8,9,10,11,12,13,14,15 | circZBTB40(5,6,7,8,9,10,11,12,13,14,15) | ZBTB40 | LYCAATFRFPGALQHHVTTEHFKQSETTFPCELCGELFTSQAQLDSHLESEHPKVMSTETQAAASQMAQSNQALMIMGLSY | VMSTETQAAASQMAQSNQALMIMGLSY | No | Junction | Junction | 27 | 3 | TTG | TGA | NA | No |
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