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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr15|58888384|58901287|-|12|circRNA|SLTM|ENST00000380516.6|17,16,15,14,13,12,11,10,9,8,7,6 | circSLTM(17,16,15,14,13,12,11,10,9,8,7,6) | SLTM | MHDLAMDPTTLANRTDLMTLITERGAGFLRVQQYSLHLLKGW | MHDLAMDPTTLANRTDLMTLITER | No | Alternative | Junction | 24 | 3 | ATG | TGA | TransCirc | No |
chr15|59030803|59031702|+|1|circRNA|RNF111|ENST00000348370.8|2 | circRNF111(2) | RNF111 | MPCYLVLVVPVRMTSAVNPLLAHQLKEKKICLFLPVKTTKTIQLFPQAFLKVSHVSMDS | MTSAVNPLLAHQLK | No | Alternative | Junction | 14 | 3 | ATG | TGA | NA | No |
chr15|59153589|59163303|-|4|circRNA|MYO1E|ENST00000288235.8|26,25,24,23 | circMYO1E(26,25,24,23) | MYO1E | MCHIPMLLEARGPIRKACTPPWPARPCLGSSLPVQTECHRRQRAWISSRSRTRELQVLCRMTFLFSMSKSMTVCLNLSSKLNS | ACTPPWPARPCLGSSLPVQTECHR | No | Alternative | Junction | 24 | 1 | ATG | TAA | TransCirc | No |
chr15|59153589|59163303|-|4|circRNA|MYO1E|ENST00000288235.8|26,25,24,23 | circMYO1E(26,25,24,23) | MYO1E | MCHIPMLLEARGPIRKACTPPWPARPCLGSSLPVQTECHRRQRAWISSRSRTRELQVLCRMTFLFSMSKSMTVCLNLSSKLNS | KACTPPWPARPCLGSSLPVQTECHR | No | Alternative | Junction | 25 | 1 | ATG | TAA | TransCirc | No |
chr15|59153589|59174240|-|7|circRNA|MYO1E|ENST00000288235.8|26,25,24,23,22,21,20 | circMYO1E(26,25,24,23,22,21,20) | MYO1E | MCHIPMLLEARGPIRKACTPPWPARPCLGSSLPVQTECHRRQRAWISSRSRTRELQAISFRRDEREKV | ELQAISFR | No | Junction | Junction | 8 | 1 | ATG | TGA | TransCirc | No |
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