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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr14|73983017|74015930|-|5|circRNA|ENTPD5|ENST00000334696.10|6,5,4,3,2 | circENTPD5(6,5,4,3,2).A | ENTPD5 | LPEHKAKALLFEFSLFLVNKEMWSVLAESSYRQDHYGAVR | QDHYGAVR | No | Alternative | Junction | 8 | 1 | CTG | TAG | TransCirc | No |
chr14|73983017|74015930|-|5|circRNA|ENTPD5|ENST00000334696.10|6,5,4,3,2 | circENTPD5(6,5,4,3,2).A | ENTPD5 | LSFPCSWSTKKCGVSWLNPHTDKIIMVLLGRTCIQM | IIMVLLGR | No | Alternative | Junction | 8 | 2 | TTG | TAA | NA | No |
chr14|74663898|74692328|-|18|circRNA|AREL1|ENST00000557401.5|19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2 | circAREL1(19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4,3,2) | AREL1 | MDPGASFGSRLHPALERSPGMIYSWAVFLYPGVHPVHPRNTDLITVTKSDG | NTDLITVTK | No | Alternative | Junction | 9 | 3 | ATG | TAG | TransCirc | No |
chr14|74797579|74799697|+|1|circRNA|YLPM1|ENST00000325680.11|5 | circYLPM1(5) | YLPM1 | LEAVGRKCQVVFKGARTGVQLAAEKGDHLGGLAVRRGDLFEGLGVEREYHPEELGAGREDHLEGLAVEKGDWEDQILVVIEVHSDQNQEMVGKKCIHITGMSLLGLHGTMEKSEGMKSFH | GDLFEGLGVER | No | Alternative | Alternative | 11 | 3 | CTG | TAG | TransCirc | No |
chr14|74809379|74829343|+|13|circRNA|YLPM1|ENST00000552421.5|6,7,8,9,10,11,12,13,14,15,16,17,18 | circYLPM1(6,7,8,9,10,11,12,13,14,15,16,17,18) | YLPM1 | LVLKGNVTGRPLPAEWRIIFSSPMIMILVLLSLGRRGLQGRIDLPLLWANHQVQL | GNVTGRPLPAEWR | No | Alternative | Junction | 13 | 1 | CTG | TAA | TransCirc | No |
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