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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr14|31168297|31205957|-|9|circRNA|HECTD1|NM_015382|10,9,8,7,6,5,4,3,2 | circHECTD1(10,9,8,7,6,5,4,3,2) | HECTD1 | MCPVNKGDDKKKKDTNKDEEECNEPKGDPEMAPIYLKRLLPVFAQTFQQTMLPSISKETFKKPWQMWTQIHCWNGYRWDREMKGTCN | KPWQMWTQIHCWNGYRWDR | No | Alternative | Junction | 19 | 3 | ATG | TAA | TransCirc | No |
chr14|31308933|31318292|-|4|circRNA|HEATR5A|NM_015473|29,28,27,26 | circHEATR5A(29,28,27,26) | HEATR5A | LHYYNSWALILHATALWLTSTGFVVADPDEGASNLSRPVTPTSMCQGSSSGATIKSPEDVYTDRFHLILGRSSA | FHLILGR | No | Alternative | Junction | 7 | 3 | TTG | TAG | TransCirc | No |
chr14|32535553|32546999|+|2|circRNA|AKAP6|NM_004274|3,4 | circAKAP6(3,4) | AKAP6 | LLPHPHLSLVIREVGMPNCNCSQKHPVHQLLLRAVNPLLAQTTSCLRCHFFQNTKAKKVKPPLQVTSLGMVRLWRPGMALMNT | AVNPLLAQTTSCLR | No | Alternative | Alternative | 14 | 2 | CTG | TAG | TransCirc | No |
chr14|32821401|32824815|+|1|circRNA|AKAP6|NM_004274|13 | circAKAP6(13) | AKAP6 | MTRKILNAFLRPVLRVTLMERSLVSLVLLQMNLQFPAKLQCHYKQQHVLLSSVIVLFQLMMQIQWLFQVLPLRKELRLERK | ILNAFLRPVLRVTLMER | No | Alternative | Alternative | 17 | 2 | ATG | TGA | NA | No |
chr14|34758703|34771659|-|5|circRNA|BAZ1A|ENST00000358716.8|24,23,22,21,20 | circBAZ1A(24,23,22,21,20) | BAZ1A | LGRRSSGRQGGVHELSAFEQLVVELVRHDDSWPFLKLVSKIQTFGDKNRNSKYCINKCKYTTISEQCGSLSGNGTLSNRAGH | YTTISEQCGSLSGNGTLSNR | No | Alternative | Junction | 20 | 3 | CTG | TGA | TransCirc | No |
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