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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr14|104157754|104167048|+|2|circRNA|KIF26A|ENST00000423312.6|4,5 | circKIF26A(4,5) | KIF26A | LPAQGRLQDQGQPWQHREGRGSGGGRGGGRHGPRMPPRGRP | GGGRHGPR | No | Alternative | Junction | 8 | 1 | CTG | TGA | TransCirc | No |
chr14|104886039|104887978|+|2|circRNA|CEP170B|ENST00000556508.5|10,11 | circCEP170B(10,11) | CEP170B | LWMPSVRGAAPRGRRRTPCLGTRTWTQPAPSACVVARAGPAPQPPSLCGHRRRCRHPRQLHRTREAPPWSVPVSSPQRGSITHLARRTWAVESRYGAQP | GSITHLARR | No | Alternative | Alternative | 9 | 1 | CTG | TAA | TransCirc | No |
chr14|104886039|104887978|+|2|circRNA|CEP170B|ENST00000556508.5|10,11 | circCEP170B(10,11) | CEP170B | MAWDVEAGSRRGPCLCACGDGSLSCPVRGLTALRAQRAAGGVGLGHRSWTVSSPAASSARRSWILTASAMPVGRTGAEAPSQGWSHRTADAGAPRRGPRGAGVGAHQGPPGSQLPPLSSLGTRMGTLCYLGNRLRLQGMGRA | GLTALRAQR | No | Alternative | Alternative | 9 | 1 | ATG | TAG | TransCirc | No |
chr14|104886039|104887978|+|2|circRNA|CEP170B|ENST00000556508.5|10,11 | circCEP170B(10,11) | CEP170B | MAWDVEAGSRRGPCLCACGDGSLSCPVRGLTALRAQRAAGGVGLGHRSWTVSSPAASSARRSWILTASAMPVGRTGAEAPSQGWSHRTADAGAPRRGPRGAGVGAHQGPPGSQLPPLSSLGTRMGTLCYLGNRLRLQGMGRA | TADAGAPR | No | Alternative | Alternative | 8 | 1 | ATG | TAG | TransCirc | No |
chr14|105217543|105217800|-|1|circRNA|BRF1|NM_145685|11 | circBRF1(11) | BRF1 | MLEQKKISSKINYSVLRGLSSAGGGSPHREDAQPEHSASARKLSRRRTPASRSGADPVTSVGKSPRSLASDGSQFRPVPPGRPSRRCWSRRRSPARSIIACSGASAAPAGAVRTGRMHSPSIAPVPGSCHEGGRRPAEVGLTL | SIIACSGASAAPAGAVR | No | Alternative | Junction | 17 | 1 | ATG | TGA | TransCirc | No |
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