Short-Read CircRNA Encoded Peptides

Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:

*Click CircRNA to view comprehensive information in new page.

*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)

CircRNA	CircRNA UID	Gene	ORF	Peptide	ORF Found in Long-Read	Peptide Type	ORF Type	Peptide Length	Frame	Start Codon	Stop Codon	Ribo-Seq Peptide Support	Neoantigen Support
chr8\|140397619\|140405698\|-\|2\|circRNA\|TRAPPC9\|NM_001160372\|7,6	circTRAPPC9(7,6)	TRAPPC9	LSWKRASRLYVSLQFRNGAWKHQNFFRMQFTLTFDRCPHHQWHQP	HQNFFRMQFTLTFDR	No	Alternative	Junction	15	2	TTG	TGA	TransCirc	No
chr8\|140664916\|140668424\|-\|2\|circRNA\|PTK2\|ENST00000522684.5\|31,30	circPTK2(31,30)	PTK2	LWMRPFPSYQPAPTESFSPRKSAPLLLPTWTGRMIRCTRM	KSAPLLLPTWTGR	No	Alternative	Junction	13	2	CTG	TGA	TransCirc	No
chr8\|140664916\|140674404\|-\|3\|circRNA\|PTK2\|ENST00000522684.5\|31,30,29	circPTK2(31,30,29)	PTK2	LWMRPFPSYQPAPTERSCSSTKETASPWSSRSSGKPCQPQQPC	LWMRPFPSYQPAPTER	No	Alternative	Junction	16	2	CTG	TGA	TransCirc	No
chr8\|140664916\|140674404\|-\|3\|circRNA\|PTK2\|ENST00000522684.5\|31,30,29	circPTK2(31,30,29)	PTK2	LWMRPFPSYQPAPTERSCSSTKETASPWSSRSSGKPCQPQQPC	LWMRPFPSYQPAPTERSCSSTK	No	Junction	Junction	22	2	CTG	TGA	TransCirc	No
chr8\|140700890\|140879637\|-\|23\|circRNA\|PTK2\|ENST00000522684.5\|26,25,24,23,22,21,20,19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4	circPTK2(26,25,24,23,22,21,20,19,18,17,16,15,14,13,12,11,10,9,8,7,6,5,4)	PTK2	LAGKRGKISGHHSEDSGQSQSKACGLLWIPPQSPAVRGGSLASRGYGRLQCEGEV	ACGLLWIPPQSPAVR	No	Alternative	Junction	15	3	CTG	TGA	riboCIRC,TransCirc	No

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