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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr12|109201566|109212936|+|4|circRNA|ACACB|ENST00000338432.11|19,20,21,22 | circACACB(19,20,21,22) | ACACB | MQPPCSGRLIERSSSSTPRASCSWSRGDEDDHDPERSGKRPGEVHQASRCRAGSRLRGGQAGAR | MQPPCSGRLIER | No | Alternative | Junction | 12 | 2 | ATG | TGA | TransCirc | No |
chr12|109201566|109212936|+|4|circRNA|ACACB|ENST00000338432.11|19,20,21,22 | circACACB(19,20,21,22) | ACACB | MQPPCSGRLIERSSSSTPRASCSWSRGDEDDHDPERSGKRPGEVHQASRCRAGSRLRGGQAGAR | SGKRPGEVHQASR | No | Alternative | Junction | 13 | 2 | ATG | TGA | TransCirc | No |
chr12|109446807|109447066|-|1|ciRNA|RP11-256L11.3|ENST00000539987.1|1 | ciRP11-256L11.3(1) | RP11-256L11.3 | LAHRGLSASSARTSQGGRWTPCDSRGERHSLWGVTFKTVCKLKRHLIVYIQNDPYFNLSPKEFIVCGCGGPVRSQCHLP | GLSASSAR | No | Alternative | Junction | 8 | 1 | CTG | TGA | NA | No |
chr12|109456117|109458078|-|3|circRNA|KCTD10|NM_031954|6,5,4 | circKCTD10(6,5,4) | KCTD10 | MLLGMKSAAGPFMVRAGRLLKSVVPPSSMPLRRNRPRTKILMSLSARSL | ILMSLSAR | No | Alternative | Junction | 8 | 3 | ATG | TGA | TransCirc | No |
chr12|109456117|109458078|-|3|circRNA|KCTD10|NM_031954|6,5,4 | circKCTD10(6,5,4) | KCTD10 | MLLGMKSAAGPFMVRAGRLLKSVVPPSSMPLRRNRPRTKILMSLSARSL | LLKSVVPPSSMPLR | No | Alternative | Junction | 14 | 3 | ATG | TGA | TransCirc | No |
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