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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr11|94850113|94859715|+|3|circRNA|AMOTL1|ENST00000317829.12|6,7,8 | circAMOTL1(6,7,8) | AMOTL1 | MPEYNAPALLELVREKEERILALEADMTKWEQKYLEESTIRHFAMNAAATAAAERQRILEGKGEIRNGVSSSADCK | NGVSSSADCK | No | Alternative | Junction | 10 | 1 | ATG | TGA | TransCirc | No |
chr11|9713465|9729451|+|4|circRNA|SWAP70|ENST00000318950.10|3,4,5,6 | circSWAP70(3,4,5,6) | SWAP70 | LPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQGPRQL | QEWIQGPR | No | Junction | Junction | 8 | 1 | TTG | TGA | TransCirc | No |
chr11|977094|988689|+|6|circRNA|AP2A2|ENST00000332231.9|5,6,7,8,9,10 | circAP2A2(5,6,7,8,9,10) | AP2A2 | MCDRSNAPQIVAEMLSYLETADYSIREEIRHYGQREAERGPVLAAPVQDVPRSCPHGRLDIPSGAPAQ | GPVLAAPVQDVPR | No | Alternative | Junction | 13 | 1 | ATG | TGA | TransCirc | No |
chr11|9807999|9809002|-|2|circRNA|SBF2|ENST00000617179.4|30,29 | circSBF2(30,29) | SBF2 | LSGEWFCSSLLTVLRLCTPASQDNAAGCGCIRST | LCTPASQDNAAGCGCIR | No | Junction | Junction | 17 | 3 | CTG | TGA | TransCirc | No |
chr11|9856733|9858225|-|1|ciRNA|SBF2|ENST00000617179.4|16 | ciSBF2(16) | SBF2 | MLILTHLESIHRANTCHCFFVSHSKEVYPGASPRLGTSETIDIPALHKL | EVYPGASPR | No | Alternative | Alternative | 9 | 1 | ATG | TAA | NA | No |
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