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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr11|75562319|75563700|+|1|ciRNA|SERPINH1|ENST00000533603.5|1 | ciSERPINH1(1) | SERPINH1 | LALFLPFYSEVVDLQGPCRLGTGCALCARGLLTISPLPAPAVRGGRRLRACGPGERRAIWGCARE | GLLTISPLPAPAVR | No | Junction | Junction | 14 | 2 | CTG | TAA | NA | No |
chr11|75562319|75563700|+|1|ciRNA|SERPINH1|ENST00000533603.5|1 | ciSERPINH1(1) | SERPINH1 | LALFLPFYSEVVDLQGPCRLGTGCALCARGLLTISPLPAPAVRGGRRLRACGPGERRAIWGCARE | LGTGCALCAR | No | Alternative | Junction | 10 | 2 | CTG | TAA | NA | No |
chr11|75562319|75563700|+|1|ciRNA|SERPINH1|ENST00000533603.5|1 | ciSERPINH1(1) | SERPINH1 | LQGLTSRGWGSLPPSLETFLRWLKSRKENECTSRLAQSLSPSSSLFPAGPSGLYGPDGGLRKMRGLWFSGIPAGATPSCLQMVHVPIPPSRPLLCLLCHRDSQQRFFFCTGCVTGHRMQPSGGALCFCEEGPLCWEGRPLFIPRDLG | LAQSLSPSSSLFPAGPSGLYGPDGGLR | No | Alternative | Alternative | 27 | 2 | CTG | TGA | NA | No |
chr11|75562319|75563700|+|1|ciRNA|SERPINH1|ENST00000533603.5|1 | ciSERPINH1(1) | SERPINH1 | LRARAEIGAGLGVRALGGLGKSAGTPKRWWWQIRD | AEIGAGLGVR | No | Alternative | Alternative | 10 | 1 | CTG | TAG | NA | No |
chr11|75562319|75563700|+|1|ciRNA|SERPINH1|ENST00000533603.5|1 | ciSERPINH1(1) | SERPINH1 | LRARAEIGAGLGVRALGGLGKSAGTPKRWWWQIRD | ALGGLGK | No | Alternative | Alternative | 7 | 1 | CTG | TAG | NA | No |
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