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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr19|9856806|9860794|-|4|circRNA|OLFM2|NM_001304347|5,4,3,2 | circOLFM2(5,4,3,2) | OLFM2 | LTRWPPVRIAGLSSRTQKRAGSCTPQPRPLTGNASARP | IAGLSSR | No | Alternative | Junction | 7 | 1 | CTG | TGA | TransCirc | No |
chr2|100006631|100011571|-|4|circRNA|AFF3|NM_001025108|6,5,4,3 | circAFF3(6,5,4,3) | AFF3 | LEMVLADSSLGPNKCAMWRWAFRPRRGHLPWRPSTAAADTVFRTFLHP | RGHLPWRPSTAAADTVFR | No | Alternative | Alternative | 18 | 1 | TTG | TAG | NA | No |
chr2|101257790|101266879|+|4|circRNA|CNOT11|ENST00000289382.7|2,3,4,5 | circCNOT11(2,3,4,5) | CNOT11 | LEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRIFTSYNSTRKVFSFPADAGTPTGTLQKDASPDCTDGRWKHGPVCGH | IFTSYNSTRK | No | Alternative | Junction | 10 | 1 | TTG | TAG | TransCirc | No |
chr2|101257790|101266879|+|4|circRNA|CNOT11|ENST00000289382.7|2,3,4,5 | circCNOT11(2,3,4,5) | CNOT11 | LEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRIFTSYNSTRKVFSFPADAGTPTGTLQKDASPDCTDGRWKHGPVCGH | VFSFPADAGTPTGTLQK | No | Alternative | Junction | 17 | 1 | TTG | TAG | TransCirc | No |
chr2|101281858|101282057|-|1|circRNA|RNF149|ENST00000424632.5|6 | circRNF149(6) | RNF149 | MPAPESPPGRDPAANLSLALPDDDGSDDSSPPSASPAESEPQCDPSFKGDAGENTALLGRAWGCTGDACSRISSWKGSSCKFESSFTR | AWGCTGDACSRISSWK | No | Alternative | Junction | 16 | 1 | ATG | TGA | TransCirc | No |
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