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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr19|7167967|7170751|-|2|circRNA|INSR|ENST00000341500.9|7,6 | circINSR(7,6) | INSR | MGAVLAPRLPRPLGVHAVLQRGELLLLCLGQPEPKAALGLEQTQPHHHSGETLLPL | MGAVLAPR | No | Alternative | Junction | 8 | 2 | ATG | TAA | TransCirc | No |
chr19|7444203|7444454|+|1|circRNA|CTD-2207O23.3|ENST00000593531.5|7 | circCTD-2207O23.3(7) | CTD-2207O23.3 | LAASSHALTTCWRRTATSSLGSRSAARSPWRRAVTGIMSSRKSATSWFSRADADRGAPRADAQDHAEGVLQGPAGGAAVQQQGHWPPLPMR | AVTGIMSSR | No | Alternative | Junction | 9 | 1 | TTG | TGA | riboCIRC,TransCirc | No |
chr19|7553871|7555763|+|6|circRNA|PNPLA6|ENST00000221249.10|22,23,24,25,26,27 | circPNPLA6(22,23,24,25,26,27) | PNPLA6 | LALSSERCTRRSAAPAARSSGPGSGPSRLWVGCAPTLGTHQPSQQPGNCGNPACVC | RSAAPAAR | No | Alternative | Junction | 8 | 3 | TTG | TGA | TransCirc | No |
chr19|756889|760039|+|2|circRNA|MISP|ENST00000215582.7|2,3 | circMISP(2,3) | MISP | LAGLPPGRQGCPPGTSNMGTPPRGRGGQGDEDLPPGCWGR | LAGLPPGR | Yes | Alternative | Alternative | 8 | 2 | TTG | TGA | NA | No |
chr19|756889|760039|+|2|circRNA|MISP|ENST00000215582.7|2,3 | circMISP(2,3) | MISP | MLGTLTPGGCVTWSGSAGPSSRARQSGRAAPWPRSRALLTTETPGPPAHLGPRPWRRTWLTGSRLTSWQRDSSS | MLGTLTPGGCVTWSGSAGPSSR | Yes | Alternative | Alternative | 22 | 1 | ATG | TGA | NA | No |
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