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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr19|35722718|35722963|+|1|ciRNA|KMT2B|ENST00000420124.2|5 | ciKMT2B(5) | KMT2B | LVALWRRWGDWTAMSGLGMTPHLGDMHQEPRREGAKSGAQGLGGKWAGVLGPRATSFGGTRNLAL | LVALWRR | No | Alternative | Junction | 7 | 2 | CTG | TGA | NA | No |
chr19|3647409|3648624|-|1|ciRNA|PIP5K1C|NM_001195733|9 | ciPIP5K1C(9) | PIP5K1C | LQSHRWAPGSAAPQVGARVCSPTGGRLGLQSHRWMGAPRTPMHRGACPWKQPHQQLSGLPQPGKLLLGCPFLSPKGKVFGRLENLE | LGLQSHRWMGAPR | No | Alternative | Alternative | 13 | 2 | CTG | TGA | NA | No |
chr19|3647409|3648624|-|1|ciRNA|PIP5K1C|NM_001195733|9 | ciPIP5K1C(9) | PIP5K1C | MGLADVSCVGARVCSPTGGRPGSAVPQVGARVCSPTGGRPGLQPHRWAPGSAVPQVDGRPQDTHAQRRLPVETAAPAALGASSTWKALAWLPLLEP | MGLADVSCVGAR | No | Junction | Junction | 12 | 1 | ATG | TAA | NA | No |
chr19|36718947|36720561|+|1|circRNA|ZNF567|ENST00000588311.5|4 | circZNF567(4) | ZNF567 | MSVMTVGSPSARRQHSLYIRESIQVRNPTFVKNVGSPFTRRQILLYIRELIQGKSPIFVMNVGNPSPRRQPLLFMRKLIMRRNPIFVVNVESPSARRQPL | MSVMTVGSPSAR | No | Alternative | Alternative | 12 | 1 | ATG | TAG | TransCirc | No |
chr19|3728423|3730706|+|4|circRNA|TJP3|ENST00000541714.6|2,3,4,5 | circTJP3(2,3,4,5) | TJP3 | MKTMGPSGWRRWTRAGAMTATHPVAPAAPGTSAPAGRGLVAGAGPAAMGVGAQVVALRPTGWPWCPALSGCHGRTCR | AGAMTATHPVAPAAPGTSAPAGR | No | Alternative | Alternative | 23 | 2 | ATG | TGA | TransCirc | No |
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