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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr19|32347244|32354957|+|2|circRNA|ZNF507|NM_001136156|2,3 | circZNF507(2,3) | ZNF507 | MWWNTSRMLNDPTVAACVTTQVATRATSSSTYESIDRDSLISVLSAST | ATSSSTYESIDRDSLISVLSAST | No | Alternative | Alternative | 23 | 1 | ATG | TAG | TransCirc | No |
chr19|32347244|32354957|+|2|circRNA|ZNF507|NM_001136156|2,3 | circZNF507(2,3) | ZNF507 | MWWNTSRMLNDPTVAACVTTQVATRATSSSTYESIDRDSLISVLSAST | MLNDPTVAACVTTQVATRATSSSTYESIDR | No | Alternative | Alternative | 30 | 1 | ATG | TAG | TransCirc | No |
chr19|32605834|32607832|-|2|circRNA|ANKRD27|NM_032139|24,23 | circANKRD27(24,23) | ANKRD27 | MQNPIRRTSVETRPSFTPAPVAITSLWHCCYRGWRRFLPVGLV | MQNPIRR | No | Alternative | Junction | 7 | 2 | ATG | TGA | TransCirc | No |
chr19|32619259|32622619|-|3|circRNA|ANKRD27|NM_032139|20,19,18 | circANKRD27(20,19,18) | ANKRD27 | LCSPRSAPWTPSAKSPPLPASPPCQPAQGRRRPRRTTESV | SPPLPASPPCQPAQGRR | No | Alternative | Junction | 17 | 2 | CTG | TGA | TransCirc | No |
chr19|33002246|33003000|-|2|circRNA|RHPN2|NM_033103|9,8 | circRHPN2(9,8) | RHPN2 | LGQLSLREGPPLRGPGPLLHCHPPHRPPGGFKLPERHIYPYSKLRHEPCHAQRARQNDACTSPRKRV | LGQLSLR | No | Alternative | Junction | 7 | 3 | CTG | TGA | TransCirc | No |
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