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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr19|17300855|17301624|-|1|circRNA|ABHD8|ENST00000247706.3|2 | circABHD8(2) | ABHD8 | LQRRPGRRGALFHPWCRRFPGHLEGAAGLLCAPRL | FPGHLEGAAGLLCAPR | No | Alternative | Alternative | 16 | 2 | CTG | TGA | TransCirc | No |
chr19|17497254|17500876|+|4|circRNA|SLC27A1|ENST00000252595.11|7,8,9,10 | circSLC27A1(7,8,9,10) | SLC27A1 | LARGERLHHRGGGRAEPPAGPDRRGRLWGGCSRWFSTSGRSAATC | GRLWGGCSR | No | Alternative | Junction | 9 | 2 | CTG | TGA | TransCirc | No |
chr19|17555973|17559289|+|1|ciRNA|COLGALT1|ENST00000252599.8|1 | ciCOLGALT1(1) | COLGALT1 | LGGSARASCSLPPSGRFYACPCPLPPSGRVHACPLPAVLPWGQTQPSPQHKRDRVPPAGSFGVGWAPLLPAGPY | ASCSLPPSGR | No | Alternative | Alternative | 10 | 2 | CTG | TAG | NA | No |
chr19|17555973|17559289|+|1|ciRNA|COLGALT1|ENST00000252599.8|1 | ciCOLGALT1(1) | COLGALT1 | LGGSARASCSLPPSGRFYACPCPLPPSGRVHACPLPAVLPWGQTQPSPQHKRDRVPPAGSFGVGWAPLLPAGPY | LGGSARASCSLPPSGR | No | Alternative | Alternative | 16 | 2 | CTG | TAG | NA | No |
chr19|17555973|17559289|+|1|ciRNA|COLGALT1|ENST00000252599.8|1 | ciCOLGALT1(1) | COLGALT1 | LSPSGGSREPLLAVPIGVGPREPLPAVLFWAGPRVLPARYPHRDGSTHAPARCPHRDGSTRAPCLLSSHGARHSPPHNTSGTEFLLLAPLGWAGHRFCLLDPTRAAPASLTGALTPSGARTPPKDGAQSPHWGVARGHI | EPLPAVLFWAGPR | No | Alternative | Alternative | 13 | 3 | CTG | TAA | NA | No |
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