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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr17|81914721|81915439|-|1|ciRNA|SIRT7|ENST00000574992.5|1 | ciSIRT7(1) | SIRT7 | LKCHDPREHGSGAEWPLPNPEPLPNLAGTVQPLALPATPGASGLEEGQPLPTTGPLDSWWLDLLCVLLSKALWGDGAAPGFGSHRRGSEQPRCGRVLTSPPPLAAIPPLA | ALWGDGAAPGFGSHR | No | Alternative | Alternative | 15 | 3 | CTG | TAA | NA | No |
chr17|81914721|81915439|-|1|ciRNA|SIRT7|ENST00000574992.5|1 | ciSIRT7(1) | SIRT7 | LRKSPGWLVHLPGTRQSTLVPSGQLTAPALCLPVDSHDEHPPSGLGRGFDPPVLDSPGQKGSSPSEPSHPQPASASELLVAFPLCDSLAFFCGPQKPS | KSPGWLVHLPGTR | No | Alternative | Junction | 13 | 1 | TTG | TAG | NA | No |
chr17|81979183|81985607|+|3|circRNA|ASPSCR1|ENST00000581484.5|2,3,4 | circASPSCR1(2,3,4) | ASPSCR1 | LQLDDGSRLQDSFCSGQTLWELLSHFPQIRFWRTRAGGRTSTPVNMI | AGGRTSTPVNMI | No | Alternative | Junction | 12 | 1 | TTG | TGA | TransCirc | No |
chr17|82062988|82063467|-|1|ciRNA|DUS1L|ENST00000306796.9|4 | ciDUS1L(4) | DUS1L | LGSAVCRALGSGAWPLKWEHHGPLRSCVSWLGGW | ALGSGAWPLKWEHHGPLR | No | Alternative | Junction | 18 | 3 | CTG | TGA | NA | No |
chr17|82062988|82063467|-|1|ciRNA|DUS1L|ENST00000306796.9|4 | ciDUS1L(4) | DUS1L | LGSAVCRALGSGAWPLKWEHHGPLRSCVSWLGGW | LGSAVCR | No | Alternative | Junction | 7 | 3 | CTG | TGA | NA | No |
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