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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr17|81194995|81195834|-|1|ciRNA|CEP131|ENST00000374782.7|16 | ciCEP131(16) | CEP131 | LGASASLAMLPTSLGSDGPEPRFWSGAWHWHFKIPARDCG | LGASASLAMLPTSLGSDGPEPR | No | Alternative | Alternative | 22 | 2 | CTG | TGA | NA | No |
chr17|81194995|81195834|-|1|ciRNA|CEP131|ENST00000374782.7|16 | ciCEP131(16) | CEP131 | LPSHVSGHQGVWQGGPGPPAWPRALGRAAVALSRGSTPNHECRPCAGGPGSPALTVPTGWQRDGGVLRVVS | AAVALSR | No | Alternative | Alternative | 7 | 1 | CTG | TGA | NA | No |
chr17|81194995|81195834|-|1|ciRNA|CEP131|ENST00000374782.7|16 | ciCEP131(16) | CEP131 | LPSHVSGHQGVWQGGPGPPAWPRALGRAAVALSRGSTPNHECRPCAGGPGSPALTVPTGWQRDGGVLRVVS | GSTPNHECRPCAGGPGSPALTVPTGWQRDGGVLR | No | Alternative | Alternative | 34 | 1 | CTG | TGA | NA | No |
chr17|81270917|81272627|-|2|circRNA|SLC38A10|NM_001037984|10,9 | circSLC38A10(10,9) | SLC38A10 | LLHLPGADLQENPQERTFLPAKRWHLCSRGLHAPSPV | GLHAPSPV | No | Alternative | Junction | 8 | 2 | CTG | TAA | TransCirc | No |
chr17|81270917|81277133|-|4|circRNA|SLC38A10|NM_001037984|10,9,8,7 | circSLC38A10(10,9,8,7) | SLC38A10 | LGLTGATMGSLICFICPALIYKKIHKNALSSQPGAAHLRQPG | NALSSQPGAAHLR | No | Junction | Junction | 13 | 3 | CTG | TGA | TransCirc | No |
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