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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr17|16158759|16165161|-|2|circRNA|NCOR1|ENST00000268712.7|6,5 | circNCOR1(6,5) | NCOR1 | LKKRQLNLLSLRSPCPLLLWSRNTAVLSKLFMMRIGIQHSEANMKLHPLQFRGNHVEMIKMLHLQNSQRKS | IGIQHSEANMKLHPLQFR | No | Junction | Junction | 18 | 2 | TTG | TAA | TransCirc | No |
chr17|16158759|16165161|-|2|circRNA|NCOR1|ENST00000268712.7|6,5 | circNCOR1(6,5) | NCOR1 | LKKRQLNLLSLRSPCPLLLWSRNTAVLSKLFMMRIGIQHSEANMKLHPLQFRGNHVEMIKMLHLQNSQRKS | LFMMRIGIQHSEANMK | No | Junction | Junction | 16 | 2 | TTG | TAA | TransCirc | No |
chr17|16348615|16350029|-|2|circRNA|CENPV|ENST00000476243.5|3,2 | circCENPV(3,2) | CENPV | LGSAVPANQRHCYPGLCPSSSALDGAERGIICGVGWLSWLGRSGIEDAGGCSQSGICSVFL | GIICGVGWLSWLGR | No | Alternative | Alternative | 14 | 1 | CTG | TAG | NA | No |
chr17|16348615|16350029|-|2|circRNA|CENPV|ENST00000476243.5|3,2 | circCENPV(3,2) | CENPV | LGSAVPANQRHCYPGLCPSSSALDGAERGIICGVGWLSWLGRSGIEDAGGCSQSGICSVFL | LGSAVPANQR | No | Alternative | Alternative | 10 | 1 | CTG | TAG | NA | No |
chr17|16348615|16350029|-|2|circRNA|CENPV|ENST00000476243.5|3,2 | circCENPV(3,2) | CENPV | LWGRLALMAGPLRHRGCRWLLTIWNLLCLSVVAAFARRSRIDTSLFQLLASSS | LALMAGPLR | No | Alternative | Alternative | 9 | 3 | CTG | TGA | NA | No |
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