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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7|832504|838986|+|2|circRNA|SUN1|NM_001171946|2,3 | circSUN1(2,3) | SUN1 | MLWILRRSTNWTLYLILHGCPAVVCAWPRQHAPWGMVRLWVPTAAPAALSP | MLWILRR | No | Alternative | Alternative | 7 | 3 | ATG | TGA | TransCirc | No |
chr7|865951|869516|+|2|circRNA|SUN1|ENST00000389574.7|15,16 | circSUN1(15,16) | SUN1 | LVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYVAAS | TLSPTGNISSAPKDFAVYVAAS | No | Junction | Junction | 22 | 1 | CTG | TGA | TransCirc | No |
chr7|87426749|87440402|-|4|circRNA|ABCB4|ENST00000359206.7|16,15,14,13 | circABCB4(16,15,14,13) | ABCB4 | MMKRLPLEWPQMAGNLAYLGILLRKTLKIHKCVRRALMWKPMDLLTLMGRILGTLM | LTLMGRILGTLM | No | Alternative | Junction | 12 | 2 | ATG | TAA | TransCirc | No |
chr7|891066|892251|+|1|ciRNA|SUN1|ENST00000457861.1|13 | ciSUN1(13) | SUN1 | LECPTHAPRLSPTAGRPCGLCCTQACLGQFFPALSGNAWNCEHLPRGPSRQLAGASCRPGSGRCLLLRGPFRQLGRCLLLRGPSRQLAGASCRPGSGRCLLQGLAFASFLTKALLVPVSFFPQNKYGFQGGRWGFDVGFGDRHPLTSALPAAELCQELASVT | CLLQGLAFASFLTK | No | Alternative | Alternative | 14 | 1 | CTG | TAA | NA | No |
chr7|891066|892251|+|1|ciRNA|SUN1|ENST00000457861.1|13 | ciSUN1(13) | SUN1 | LECPTHAPRLSPTAGRPCGLCCTQACLGQFFPALSGNAWNCEHLPRGPSRQLAGASCRPGSGRCLLLRGPFRQLGRCLLLRGPSRQLAGASCRPGSGRCLLQGLAFASFLTKALLVPVSFFPQNKYGFQGGRWGFDVGFGDRHPLTSALPAAELCQELASVT | GPSRQLAGASCRPGSGR | No | Alternative | Alternative | 17 | 1 | CTG | TAA | NA | No |
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